RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 MICU1Q9BPX6 476 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF768Q9H5H4 540 aaKnown RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 GAPDHSO14556 408 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 KLK8O60259 260 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 SEMA4FO95754 770 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 MYOGP15173 224 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 S1PR1P21453 382 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 GRPRP30550 384 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 MRPL19P49406 292 aaKnown RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 ACVR1Q04771 509 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF674Q2M3X9 581 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 DEFB134Q4QY38 66 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 ASPGQ86U10 573 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 SLC35F2Q8IXU6 374 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 OR51L1Q8NGJ5 315 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 LHFPL5Q8TAF8 219 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 LGALS14Q8TCE9 139 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 FAM3CQ92520 227 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 TSACCQ96A04 125 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 FOXRED1Q96CU9 486 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 CDC6Q99741 560 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 SLC6A20Q9NP91 592 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 SMCO4Q9NRQ5 59 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 CA5BQ9Y2D0 317 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 ZDBF2Q9HCK1 2354 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 PHIPQ8WWQ0 1821 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 AGAP14A8MT82 685 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF736B4DX44 427 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 ATP1B1P05026 303 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 EIF2S3P41091 472 aaKnown RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 PDZK1IP1Q13113 114 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 PIP5KL1Q5T9C9 394 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 H3F3CQ6NXT2 135 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 KCTD18Q6PI47 426 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 NRROSQ86YC3 692 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 DNAAF1Q8NEP3 725 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF417Q8TAU3 575 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 PHOSPHO1Q8TCT1 267 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 SLC38A5Q8WUX1 472 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 VRK1Q99986 396 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 OR52D1Q9H346 318 aa10.51□□□□□ -0.73
TCOF1-211ENST00000513346 C19orf25Q9UFG5 118 aaPredicted RBP10.51□□□□□ -0.73
TCOF1-211ENST00000513346 A8MVJ9 347 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 GPR171O14626 319 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF217O75362 1048 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 PPP1R3DO95685 299 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 DRD1P21728 446 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 HOXC12P31275 282 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 P2RY14Q15391 338 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 NKPD1Q17RQ9 610 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 HTR3DQ70Z44 454 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF550Q7Z398 422 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 NEIL2Q969S2 332 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-211ENST00000513346 KLRF1Q9NZS2 232 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 SLC7A7Q9UM01 511 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 GPR34Q9UPC5 381 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 SHOXO15266 292 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 HSPA12AO43301 675 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 JMJD7P0C870 316 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 S100PP25815 95 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 RPL19P84098 196 aaKnown RBP10.5□□□□□ -0.73
TCOF1-211ENST00000513346 RASGEF1BQ0VAM2 473 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 TPBGQ13641 420 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 SYPL1Q16563 259 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 GPAT4Q86UL3 456 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 EID2Q8N6I1 236 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 OR4K17Q8NGC6 315 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 MRPL38Q96DV4 380 aaKnown RBP10.5□□□□□ -0.73
TCOF1-211ENST00000513346 TRMT2BQ96GJ1 504 aaKnown RBP10.5□□□□□ -0.73
TCOF1-211ENST00000513346 LURAP1Q96LR2 239 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 SLC25A32Q9H2D1 315 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 PDE7BQ9NP56 450 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 KCNIP3Q9Y2W7 256 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 ABCA3Q99758 1704 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 CDK5RAP2Q96SN8 1893 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 PAPPA2Q9BXP8 1791 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 NPIPB15A6NHN6 443 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-211ENST00000513346 TTLL8A6PVC2 850 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF254O75437 659 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 CR2P20023 1033 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.5□□□□□ -0.738e-7■■□□□ 13.2
TCOF1-211ENST00000513346 TMEM200AQ86VY9 491 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 CPXM2Q8N436 756 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 METTL27Q8N6F8 245 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-211ENST00000513346 ZNF565Q8N9K5 539 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 GHSRQ92847 366 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 PTCHD1Q96NR3 888 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 LMF1Q96S06 567 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 RTP3Q9BQQ7 232 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 ACTL8Q9H568 366 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 SRA1Q9HD15 236 aaKnown RBP10.5□□□□□ -0.73
TCOF1-211ENST00000513346 UFSP2Q9NUQ7 469 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 H7C417 338 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 TNFRSF10BO14763 440 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 GPRIN2O60269 458 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 ERCC1P07992 297 aaPredicted RBP10.5□□□□□ -0.73
TCOF1-211ENST00000513346 SYPP08247 313 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 HTR1FP30939 366 aa10.5□□□□□ -0.73
TCOF1-211ENST00000513346 LUMP51884 338 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms