RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 A0A1B0GUL7 405 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 LGALS8O00214 317 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 STX7O15400 261 aaKnown RBP0.96□□□□□ -2.26
PDGFC-208ENST00000512711 CD5LO43866 347 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 B3GAT3O94766 335 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 IGLV2-23P01705 113 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 IGF1P05019 195 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 PNMA6AP0CW24 399 aaPredicted RBP0.96□□□□□ -2.26
PDGFC-208ENST00000512711 CLUP10909 449 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 TDGF1P13385 188 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 CYP2B6P20813 491 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 CXCL5P42830 114 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 TDGF1P3P51864 188 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 PLK1P53350 603 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 SELENOTP62341 195 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 MEF2BQ02080 365 aaPredicted RBP0.96□□□□□ -2.26
PDGFC-208ENST00000512711 ACTN3Q08043 901 aaPredicted RBP0.96□□□□□ -2.26
PDGFC-208ENST00000512711 RPA4Q13156 261 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 SNTB2Q13425 540 aaKnown RBP0.96□□□□□ -2.26
PDGFC-208ENST00000512711 SNX1Q13596 522 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 GRB7Q14451 532 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 PDIA5Q14554 519 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 GNMTQ14749 295 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 TMIGD1Q6UXZ0 262 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 PRSS41Q7RTY9 318 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 TAF8Q7Z7C8 310 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 MINDY2Q8NBR6 621 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 OR52P1PQ8NH57 321 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 FANK1Q8TC84 345 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 VMP1Q96GC9 406 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 LINC00477Q96M19 166 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 TAAR1Q96RJ0 339 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 ALDH8A1Q9H2A2 487 aaPredicted RBP0.96□□□□□ -2.26
PDGFC-208ENST00000512711 SPNS1Q9H2V7 528 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 CALHM2Q9HA72 323 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 MID1IP1Q9NPA3 183 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 CCL28Q9NRJ3 127 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 MRPL39Q9NYK5 338 aaKnown RBP0.96□□□□□ -2.26
PDGFC-208ENST00000512711 GGA2Q9UJY4 613 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 AP4B1Q9Y6B7 739 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 MUC6Q6W4X9 2439 aa0.96□□□□□ -2.26
PDGFC-208ENST00000512711 PCNX2A6NKB5 2137 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 ABCC4O15439 1325 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 RPL36A-HNRNPH2H7BZ11 118 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 K7EM74 188 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 SUPT3HO75486 399 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 C6orf47O95873 294 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 CXCR2P25025 360 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 NPY1RP25929 384 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 CD34P28906 385 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 CD80P33681 288 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 SPIBQ01892 262 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 GABPB1Q06547 395 aaPredicted RBP0.95□□□□□ -2.26
PDGFC-208ENST00000512711 TMEM183BQ1AE95 376 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 SLC5A12Q1EHB4 618 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 TMEM255AQ5JRV8 349 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 LDLRAP1Q5SW96 308 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 FAHD2BQ6P2I3 314 aaPredicted RBP0.95□□□□□ -2.26
PDGFC-208ENST00000512711 CCDC137Q6PK04 289 aaKnown RBP0.95□□□□□ -2.26
PDGFC-208ENST00000512711 LHFPL4Q7Z7J7 247 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 TMEM183AQ8IXX5 376 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 BATF2Q8N1L9 274 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 ARRDC1Q8N5I2 433 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 FAM86B1Q8N7N1 296 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 OR6C4Q8NGE1 309 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 OR51S1Q8NGJ8 323 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 PSMA8Q8TAA3 256 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 ZFP90Q8TF47 636 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 ASB9Q96DX5 294 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 FAHD2AQ96GK7 314 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 FCRL1Q96LA6 429 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 VSTM2LQ96N03 204 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 FOXC2Q99958 501 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 CRNKL1Q9BZJ0 848 aaKnown RBP0.95□□□□□ -2.26
PDGFC-208ENST00000512711 C20orf85Q9H1P6 137 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 CLMPQ9H6B4 373 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 PLGRKTQ9HBL7 147 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 ANO10Q9NW15 660 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 FETUBQ9UGM5 382 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 OARD1Q9Y530 152 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 HEBP2Q9Y5Z4 205 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 V9GY05 133 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 YEATS2Q9ULM3 1422 aa0.95□□□□□ -2.26
PDGFC-208ENST00000512711 CLSPNQ9HAW4 1339 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 IGLV11-55A0A075B6I3 123 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 BET1O15155 118 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 RCBTB2O95199 551 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 OLFM2O95897 454 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 PGAM1P18669 254 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 CALB2P22676 271 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 AHCYP23526 432 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 DPP4P27487 766 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 VDAC2P45880 294 aaPredicted RBP0.94□□□□□ -2.26
PDGFC-208ENST00000512711 ATXN3P54252 364 aaPredicted RBP0.94□□□□□ -2.26
PDGFC-208ENST00000512711 HSPA2P54652 639 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 OSTNP61366 133 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 RPS14P62263 151 aaKnown RBP0.94□□□□□ -2.26
PDGFC-208ENST00000512711 ENPEPQ07075 957 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 RIPPLY1Q0D2K3 151 aa0.94□□□□□ -2.26
PDGFC-208ENST00000512711 RAB40BQ12829 278 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms