RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 TMEM163Q8TC26 289 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 STK35Q8TDR2 534 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 PAQR8Q8TEZ7 354 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 FER1L6-AS2Q96M78 137 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 ATP13A2Q9NQ11 1180 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 PPP4R1LQ9P1A2 415 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 TEKT2Q9UIF3 430 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 RPL36Q9Y3U8 105 aaKnown RBP13.85□□□□□ -0.19
SCLT1-209ENST00000511426 CHCHD2Q9Y6H1 151 aaPredicted RBP13.85□□□□□ -0.19
SCLT1-209ENST00000511426 WDFY4Q6ZS81 3184 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 PCNX2A6NKB5 2137 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 KIF26BQ2KJY2 2108 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 LOC101059948A0A1B0GTJ6 334 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 KPNA4O00629 521 aaPredicted RBP13.85□□□□□ -0.19
SCLT1-209ENST00000511426 RGS10O43665 173 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 PTP4A3O75365 173 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 SLC25A12O75746 678 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 OR7A10O76100 309 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 MT-ATP6P00846 226 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 APOBEC1P41238 236 aaKnown RBP13.85□□□□□ -0.19
SCLT1-209ENST00000511426 CDH15P55291 814 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 SNAPC1Q16533 368 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 TMEM156Q8N614 296 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 RFKQ969G6 155 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 NTNG2Q96CW9 530 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 DTNBP1Q96EV8 351 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 MRGPRX4Q96LA9 322 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 SIGLEC11Q96RL6 698 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 CDCP1Q9H5V8 836 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 HPF1Q9NWY4 346 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 TVP23BQ9NYZ1 205 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 OSGIN1Q9UJX0 560 aa13.85□□□□□ -0.19
SCLT1-209ENST00000511426 EXPH5Q8NEV8 1989 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 MYO15AQ9UKN7 3530 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 IGKV1D-42A0A075B6H8 117 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 FAM47E-STBD1D6RA91 191 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 BHLHE40O14503 412 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 SURF4O15260 269 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 XPNPEP2O43895 674 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 NDUFB2O95178 105 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 SNX4O95219 450 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 LIPCP11150 499 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 ADH6P28332 368 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 PTGDSP41222 190 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 RPS4XP62701 263 aaKnown RBP13.84□□□□□ -0.19
SCLT1-209ENST00000511426 TUBA3CQ13748 450 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 ACSM5Q6NUN0 579 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 SPARTQ8N0X7 666 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 TCEANCQ8N8B7 351 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 OR5M3Q8NGP4 307 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 C9orf43Q8TAL5 461 aaPredicted RBP13.84□□□□□ -0.19
SCLT1-209ENST00000511426 FCGR1BQ92637 280 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 FGF11Q92914 225 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 UBE2FQ969M7 185 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 PLEKHA8Q96JA3 519 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 GPX7Q96SL4 187 aaPredicted RBP13.84□□□□□ -0.19
SCLT1-209ENST00000511426 ANGPTL4Q9BY76 406 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 UBQLN3Q9H347 655 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 PTGES2Q9H7Z7 377 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 FKRPQ9H9S5 495 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 GPN2Q9H9Y4 310 aaPredicted RBP13.84□□□□□ -0.19
SCLT1-209ENST00000511426 SH2D2AQ9NP31 389 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 ASCL3Q9NQ33 180 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 ZNF229Q9UJW7 825 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 DMDP11532 3685 aa13.84□□□□□ -0.19
SCLT1-209ENST00000511426 A0A0C4DFX4 3053 aa13.83□□□□□ -0.19
SCLT1-209ENST00000511426 SDK2Q58EX2 2172 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 TRAV36DV7A0A075B6V5 113 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 A0A087WZY1 265 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 A8MVM7 634 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 PTGES3LE9PB15 166 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 PRODHO43272 600 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 ZNF208O43345 1280 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 IDH3BO43837 385 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 OR2T1O43869 369 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 IGFBP1P08833 259 aaPredicted RBP13.83□□□□□ -0.2
SCLT1-209ENST00000511426 APEHP13798 732 aaKnown RBP13.83□□□□□ -0.2
SCLT1-209ENST00000511426 F8A1P23610 371 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 ZNF41P51814 821 aaPredicted RBP13.83□□□□□ -0.2
SCLT1-209ENST00000511426 AIMP2Q13155 320 aaKnown RBP13.83□□□□□ -0.2
SCLT1-209ENST00000511426 TMED1Q13445 227 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 IL10RAQ13651 578 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 MFSD13AQ14CX5 517 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 ZNF74Q16587 644 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 NADK2Q4G0N4 442 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 ARHGAP11AQ6P4F7 1023 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 KCTD8Q6ZWB6 473 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 ASCL5Q7RTU5 278 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 FADS6Q8N9I5 356 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 SAMD8Q96LT4 415 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 COPS4Q9BT78 406 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 ABI3Q9P2A4 366 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCLT1-209ENST00000511426 HIF3AQ9Y2N7 669 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 SLC6A5Q9Y345 797 aa13.83□□□□□ -0.2
SCLT1-209ENST00000511426 TLX2O43763 284 aaPredicted RBP13.82□□□□□ -0.2
SCLT1-209ENST00000511426 PRKYO43930 277 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 NTN1O95631 604 aa13.82□□□□□ -0.2
SCLT1-209ENST00000511426 CELA2AP08217 269 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms