RNA–Protein interactions for RNA: ENST00000510756.5

CAST-233, Transcript of calpastatin, human

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAST-233	ENST00000510756	SVOP	Q8N4V2	548 aa		11.15	□□□□□ -0.62
CAST-233	ENST00000510756	C9orf43	Q8TAL5	461 aa	Predicted RBP	11.15	□□□□□ -0.62
CAST-233	ENST00000510756	TMEM163	Q8TC26	289 aa		11.15	□□□□□ -0.62
CAST-233	ENST00000510756	FANK1	Q8TC84	345 aa		11.15	□□□□□ -0.62
CAST-233	ENST00000510756	MESP1	Q9BRJ9	268 aa		11.15	□□□□□ -0.62
CAST-233	ENST00000510756	POTEKP	Q9BYX7	375 aa		11.15	□□□□□ -0.62
CAST-233	ENST00000510756	RTN4R	Q9BZR6	473 aa		11.15	□□□□□ -0.62
CAST-233	ENST00000510756	CDCP1	Q9H5V8	836 aa		11.15	□□□□□ -0.62
CAST-233	ENST00000510756	ATP13A2	Q9NQ11	1180 aa		11.15	□□□□□ -0.62
CAST-233	ENST00000510756	TBC1D23	Q9NUY8	699 aa		11.15	□□□□□ -0.62
CAST-233	ENST00000510756	PPP4R1L	Q9P1A2	415 aa		11.15	□□□□□ -0.62
CAST-233	ENST00000510756	IGKV1D-42	A0A075B6H8	117 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	ENO4	A6NNW6	628 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	CLCA1	A8K7I4	914 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756		A8MVM7	634 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	ARPC3	O15145	178 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	OR2T1	O43869	369 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	PIP5K1C	O60331	668 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	CXCR1	P25024	350 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	TACR3	P29371	465 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	SLC15A1	P46059	708 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	TUBA3C	Q13748	450 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	NDUFAF6	Q330K2	333 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	SLC22A10	Q63ZE4	541 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	OR10G3	Q8NGC4	313 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	DUSP19	Q8WTR2	217 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	FCGR1B	Q92637	280 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	ZBTB8A	Q96BR9	441 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	TSSK6	Q9BXA6	273 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	RNF32	Q9H0A6	362 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	ADNP	Q9H2P0	1102 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	OR52D1	Q9H346	318 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	PTGES2	Q9H7Z7	377 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.14	□□□□□ -0.63
CAST-233	ENST00000510756	HPF1	Q9NWY4	346 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	KLRF1	Q9NZS2	232 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	OSGIN1	Q9UJX0	560 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	HIF3A	Q9Y2N7	669 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	RPL36	Q9Y3U8	105 aa	Known RBP	11.14	□□□□□ -0.63
CAST-233	ENST00000510756	SPIN1	Q9Y657	262 aa	Predicted RBP	11.14	□□□□□ -0.63
CAST-233	ENST00000510756	CPAMD8	Q8IZJ3	1885 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	KDM4E	B2RXH2	506 aa	Predicted RBP	11.14	□□□□□ -0.63
CAST-233	ENST00000510756	BHLHE40	O14503	412 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	CDC42EP2	O14613	210 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	SNPH	O15079	494 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	SCO2	O43819	266 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	NDUFB2	O95178	105 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	PRKCA	P17252	672 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	F8A1	P23610	371 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	GPR4	P46093	362 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	NHLH1	Q02575	133 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	IL10RA	Q13651	578 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	ZNF74	Q16587	644 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	DPY19L2P2	Q6ZN68	376 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	SLC46A3	Q7Z3Q1	461 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	OR2M3	Q8NG83	312 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	PFN4	Q8NHR9	129 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.14	□□□□□ -0.63
CAST-233	ENST00000510756	RFK	Q969G6	155 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	LHPP	Q9H008	270 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	RACGAP1	Q9H0H5	632 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	SACM1L	Q9NTJ5	587 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	SNX5	Q9Y5X3	404 aa		11.14	□□□□□ -0.63
CAST-233	ENST00000510756	ZNF701	M0R085	212 aa	Predicted RBP	11.13	□□□□□ -0.63
CAST-233	ENST00000510756	SURF4	O15260	269 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	ASAH2B	P0C7U1	165 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	ZNF17	P17021	662 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	ITPKB	P27987	946 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	POU1F1	P28069	291 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	CCR4	P51679	360 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	RPS18	P62269	152 aa	Known RBP	11.13	□□□□□ -0.63
CAST-233	ENST00000510756	CRYZ	Q08257	329 aa	Known RBP	11.13	□□□□□ -0.63
CAST-233	ENST00000510756		Q0VFX4	171 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	CAMK2B	Q13554	666 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	EMC4	Q5J8M3	183 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	ACER2	Q5QJU3	275 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	DCAF10	Q5QP82	559 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	ARHGAP11A	Q6P4F7	1023 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	OAF	Q86UD1	273 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	TMEM156	Q8N614	296 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	IL22RA1	Q8N6P7	574 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	GATS	Q8NAP1	163 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	OR8D4	Q8NGM9	314 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	CNIH3	Q8TBE1	160 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	PSMF1	Q92530	271 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	NXPE2	Q96DL1	559 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	DPH1	Q9BZG8	443 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	UBQLN3	Q9H347	655 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	C20orf141	Q9NUB4	165 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	DLL3	Q9NYJ7	618 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	KLHL21	Q9UJP4	597 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	CDV3	Q9UKY7	258 aa	Known RBP	11.13	□□□□□ -0.63
CAST-233	ENST00000510756	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	NPIPB13	A6NJU9	1138 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	NPIPB4	C9JG80	1138 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	PRODH	O43272	600 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	RGS10	O43665	173 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	SAG	P10523	405 aa	Predicted RBP	11.13	□□□□□ -0.63
CAST-233	ENST00000510756	FHL1	Q13642	323 aa		11.13	□□□□□ -0.63
CAST-233	ENST00000510756	ACSM5	Q6NUN0	579 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms