RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PEX5LQ8IYB4 626 aa20.38■□□□□ 0.85
SNF8-209ENST00000510558 PIGTQ969N2 578 aa20.38■□□□□ 0.85
SNF8-209ENST00000510558 ZNF775Q96BV0 537 aaPredicted RBP20.38■□□□□ 0.85
SNF8-209ENST00000510558 ZHX1-C8orf76Q96EF9 292 aa20.38■□□□□ 0.85
SNF8-209ENST00000510558 DNAJA3Q96EY1 480 aa20.38■□□□□ 0.85
SNF8-209ENST00000510558 AURKBQ96GD4 344 aaPredicted RBP20.38■□□□□ 0.85
SNF8-209ENST00000510558 PLPPR2Q96GM1 343 aa20.38■□□□□ 0.85
SNF8-209ENST00000510558 CCL19Q99731 98 aa20.38■□□□□ 0.85
SNF8-209ENST00000510558 PIP5K1AQ99755 562 aa20.38■□□□□ 0.85
SNF8-209ENST00000510558 OR11A1Q9GZK7 315 aa20.38■□□□□ 0.85
SNF8-209ENST00000510558 SLCO1B3Q9NPD5 702 aa20.38■□□□□ 0.85
SNF8-209ENST00000510558 HDGFL3Q9Y3E1 203 aa20.38■□□□□ 0.85
SNF8-209ENST00000510558 FLNAP21333 2647 aaKnown RBP20.38■□□□□ 0.85
SNF8-209ENST00000510558 DSPPQ9NZW4 1301 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 PMS2P2O95744 297 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 BCHEP06276 602 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 CCNA2P20248 432 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 HTR3AP46098 478 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 CLK1P49759 484 aaKnown RBP20.37■□□□□ 0.85
SNF8-209ENST00000510558 DSTNP60981 165 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 NKX6-1P78426 367 aaPredicted RBP20.37■□□□□ 0.85
SNF8-209ENST00000510558 P2RY6Q15077 328 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 TTMPQ5BVD1 217 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 ALKBH2Q6NS38 261 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 KRTAP1-3Q8IUG1 177 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 KISS1RQ969F8 398 aaPredicted RBP20.37■□□□□ 0.85
SNF8-209ENST00000510558 TCF7L2Q9NQB0 619 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 DLL4Q9NR61 685 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 CALML5Q9NZT1 146 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 PRSS50Q9UI38 385 aa20.37■□□□□ 0.85
SNF8-209ENST00000510558 TMED7-TICAM2A0A0A6YYA0 188 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 CFAP73A6NFT4 308 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 FAAHO00519 579 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 POLR3GO15318 223 aaPredicted RBP20.36■□□□□ 0.85
SNF8-209ENST00000510558 SMPD2O60906 423 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 TGDSO95455 350 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 TFPTP0C1Z6 253 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 EDNRAP25101 427 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 POLR2HP52434 150 aaKnown RBP20.36■□□□□ 0.85
SNF8-209ENST00000510558 CRISP3P54108 245 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 STX1BP61266 288 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 EPS8Q12929 822 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 ITGADQ13349 1161 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 ZNF704Q6ZNC4 412 aaPredicted RBP20.36■□□□□ 0.85
SNF8-209ENST00000510558 Q6ZT83 130 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.36■□□□□ 0.85
SNF8-209ENST00000510558 GALNT5Q7Z7M9 940 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 VRK2Q86Y07 508 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 GTF2H4Q92759 462 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 EMC3Q9P0I2 261 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 OSGIN1Q9UJX0 560 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 TMED7Q9Y3B3 224 aa20.36■□□□□ 0.85
SNF8-209ENST00000510558 SETD2Q9BYW2 2564 aaPredicted RBP20.35■□□□□ 0.85
SNF8-209ENST00000510558 IGKV3D-15A0A087WSY6 115 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 DNPH1O43598 174 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 PLAUP00749 431 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 UQCRBP14927 111 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 TACR3P29371 465 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 MRPL19P49406 292 aaKnown RBP20.35■□□□□ 0.85
SNF8-209ENST00000510558 PDK3Q15120 406 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 TAB1Q15750 504 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 LIN52Q52LA3 116 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 SHEQ5VZ18 495 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 LSRQ86X29 649 aaPredicted RBP20.35■□□□□ 0.85
SNF8-209ENST00000510558 ZNF440Q8IYI8 595 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 LRRC75A-AS1Q8N1F1 130 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 OR52P1PQ8NH57 321 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 SLC38A5Q8WUX1 472 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 TMEM19Q96HH6 336 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 EBF4Q9BQW3 602 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 PAIP1Q9H074 479 aaKnown RBP20.35■□□□□ 0.85
SNF8-209ENST00000510558 RLIMQ9NVW2 624 aa20.35■□□□□ 0.85
SNF8-209ENST00000510558 TMEM72A0PK05 275 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 CDHR4A6H8M9 788 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 ZNF716A6NP11 495 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 SLC1A3P43003 542 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 IDH3AP50213 366 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 OR2B6P58173 313 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 RPS26P11Q5JNZ5 115 aaPredicted RBP20.34■□□□□ 0.85
SNF8-209ENST00000510558 SLC2A7Q6PXP3 512 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 ZNF836Q6ZNA1 936 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 BHLHA15Q7RTS1 189 aaPredicted RBP20.34■□□□□ 0.85
SNF8-209ENST00000510558 ZNF100Q8IYN0 542 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 PIGXQ8TBF5 258 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 DDIT4LQ96D03 193 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 USB1Q9BQ65 265 aaKnown RBP20.34■□□□□ 0.85
SNF8-209ENST00000510558 TMEM204Q9BSN7 226 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 POTEKPQ9BYX7 375 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 THUMPD1Q9NXG2 353 aaKnown RBP20.34■□□□□ 0.85
SNF8-209ENST00000510558 TMEM181Q9P2C4 612 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 TRAPPC4Q9Y296 219 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 ZNF443Q9Y2A4 671 aaPredicted RBP20.34■□□□□ 0.85
SNF8-209ENST00000510558 PCDHB14Q9Y5E9 798 aa20.34■□□□□ 0.85
SNF8-209ENST00000510558 TMEM247A6NEH6 219 aa20.33■□□□□ 0.85
SNF8-209ENST00000510558 ARHGEF9O43307 516 aa20.33■□□□□ 0.85
SNF8-209ENST00000510558 ZNF208O43345 1280 aa20.33■□□□□ 0.85
SNF8-209ENST00000510558 LYZL6O75951 148 aa20.33■□□□□ 0.85
SNF8-209ENST00000510558 FOSL1P15407 271 aa20.33■□□□□ 0.85
SNF8-209ENST00000510558 P3H2Q8IVL5 708 aa20.33■□□□□ 0.85
SNF8-209ENST00000510558 DYDC1Q8WWB3 177 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms