RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 DCDP81605 110 aaKnown RBP8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 AANATQ16613 207 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 TUSC1Q2TAM9 212 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 IDNKQ5T6J7 187 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 FCRLBQ6BAA4 426 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 C11orf88Q6PI97 169 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 ZNF782Q6ZMW2 699 aaPredicted RBP8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 LINC00469Q8N7U9 141 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 NUP43Q8NFH3 380 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 NFKBIDQ8NI38 313 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 ADAMTS15Q8TE58 950 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 TM4SF19Q96DZ7 209 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 PYURFQ96I23 114 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 TBX5Q99593 518 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 ZNF416Q9BWM5 594 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 QRSL1Q9H0R6 528 aaKnown RBP8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 ABCD2Q9UBJ2 740 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 UBQLN2Q9UHD9 624 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 COPS3Q9UNS2 423 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 PCDHGA6Q9Y5G7 932 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 SLC22A7Q9Y694 548 aa8.02□□□□□ -1.13
LIMCH1-209ENST00000509277 C17orf105B2RV13 164 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 H3BSH0 61 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 EEF1E1O43324 174 aaKnown RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 LYRM1O43325 122 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 DNAJB5O75953 348 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 NSA2O95478 260 aaKnown RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 ZFP36L2P47974 494 aaKnown RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 WNT3P56703 355 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 RAB38P57729 211 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 C1DQ13901 141 aaKnown RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 NCF4Q15080 339 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 SAXO2Q658L1 398 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 BICRALQ6AI39 1079 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 DGAT2L6Q6ZPD8 337 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 RIMKLAQ8IXN7 391 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 SLC5A8Q8N695 610 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 GATSQ8NAP1 163 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 TSPEARQ8WU66 669 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 AMDHD1Q96NU7 426 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 SERHL2Q9H4I8 314 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 C3orf14Q9HBI5 128 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 SERHLQ9NQF3 203 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 SIRT5Q9NXA8 310 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 ZNF639Q9UID6 485 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 FXYD6-FXYD2A0A087WZ82 144 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 IDSB3KWA1 339 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 H7C2Y5 167 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 NDUFS6O75380 124 aaKnown RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 GPR75O95800 540 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 IFNA7P01567 189 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 CSF3P09919 207 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 CPMP14384 443 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 DRD2P14416 443 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 ACP1P24666 158 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 RBMS1P29558 406 aaKnown RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 TGFBR2P37173 567 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 EMP2P54851 167 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 PRKCDQ05655 676 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 CNIH2Q6PI25 160 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 SLC16A13Q7RTY0 426 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 PRSS42Q7Z5A4 293 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 VASH2Q86V25 355 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 PLCZ1Q86YW0 608 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 OR4M2Q8NGB6 313 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 KLHL6Q8WZ60 621 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 RBPMSQ93062 196 aaKnown RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 DNAJA3Q96EY1 480 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 FXYD6Q9H0Q3 95 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 SEMA3GQ9NS98 782 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 TVP23BQ9NYZ1 205 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 TMEFF2Q9UIK5 374 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 PADI2Q9Y2J8 665 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 A0A0B4J293 547 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 METTL21EPA6NDL7 271 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 GTPBP1O00178 669 aaKnown RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 SSX5O60225 188 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 CFDP00746 253 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 S100A9P06702 114 aaKnown RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 IGFBP1P08833 259 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 CT62P0C5K7 136 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 NBL1P41271 181 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 E2F1Q01094 437 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 TEKQ02763 1124 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 INSL4Q14641 139 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 GINS1Q14691 196 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 ATXN7L3Q14CW9 347 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 RSPO4Q2I0M5 234 aaPredicted RBP8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 HLA-DQA1Q5Y7H0 255 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 CPZQ66K79 652 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 CYB5R2Q6BCY4 276 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 SLC46A3Q7Z3Q1 461 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 LGI4Q8N135 537 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 IQCF1Q8N6M8 205 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 ZNF321PQ8N8H1 164 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 OR7G2Q8NG99 324 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 OR10G2Q8NGC3 310 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 OR52R1Q8NGF1 315 aa8.01□□□□□ -1.13
LIMCH1-209ENST00000509277 HAVCR2Q8TDQ0 301 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms