RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ZNF354BQ96LW1 612 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 C3orf30Q96M34 536 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SFXN2Q96NB2 322 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 LRFN5Q96NI6 719 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 LGMNQ99538 433 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 TSNAXQ99598 290 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 MAPKAP1Q9BPZ7 522 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 KCNS3Q9BQ31 491 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 C2orf88Q9BSF0 95 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 DPH7Q9BTV6 452 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 TAPBPLQ9BX59 468 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 WNT5BQ9H1J7 359 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SLC38A1Q9H2H9 487 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 NXF3Q9H4D5 531 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 REEP4Q9H6H4 257 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ELAC1Q9H777 363 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 RNF122Q9H9V4 155 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 IL1RL2Q9HB29 575 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 SEBOXQ9HB31 216 aaPredicted RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 TXNRD2Q9NNW7 524 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 MYOZ1Q9NP98 299 aaPredicted RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 EXOSC4Q9NPD3 245 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 FSCN3Q9NQT6 498 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 STARD7Q9NQZ5 370 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CHD7Q9P2D1 2997 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 NLKQ9UBE8 527 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 LAMP5Q9UJQ1 280 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ERVK-19Q9WJR5 959 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 TP53TG5Q9Y2B4 290 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 AAR2Q9Y312 384 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 UBE2J1Q9Y385 318 aaPredicted RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 PKP3Q9Y446 797 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 V9GYQ6 96 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 CHD9Q3L8U1 2897 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 ARID2Q68CP9 1835 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 TPRP12270 2363 aaKnown RBP4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 DCHS1Q96JQ0 3298 aa4.2□□□□□ -1.74
PDLIM5-211ENST00000508531 PCM1Q15154 2024 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 A0A1W2PQL4 384 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 MTMR11A4FU01 709 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ARRDC5A6NEK1 342 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CXorf65A6NEN9 183 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 RRN3P2A6NIE6 340 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ACOD1A6NK06 481 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 TMEM210A6NLX4 147 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 A8MT66 165 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 TMEM189-UBE2V1I3L0A0 370 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 J3KTA2 159 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PLA2G10O15496 165 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 DHHO43323 396 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CHST10O43529 356 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 SSX4O60224 188 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PLOD3O60568 738 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 RDH16O75452 317 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 WBP4O75554 376 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 GPX5O75715 221 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 EIF3GO75821 320 aaKnown RBP eCLIP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 RBBP9O75884 186 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 OR4F21O95013 312 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 METTL18O95568 372 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PIGRP01833 764 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CSF2P04141 144 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 FABP3P05413 133 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ITGA5P08648 1049 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 HOXC6P09630 235 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 HIST1H2AGP0C0S8 130 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 UROSP10746 265 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CLUP10909 449 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CYP4B1P13584 511 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 IL9P15248 144 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 NPR2P20594 1047 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 HIST1H2ADP20671 130 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PPIBP23284 216 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 NFYAP23511 347 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CYP2F1P24903 491 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PTAFRP25105 342 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 AZGP1P25311 298 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 LAP3P28838 519 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 S100A2P29034 98 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 PDHA2P29803 388 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 FGF9P31371 208 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CCR10P46092 362 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 POU3F4P49335 361 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CSNK1EP49674 416 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 RBP2P50120 134 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CLCN4P51793 760 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 HMGCS2P54868 508 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 SKP1P63208 163 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 SHC2P98077 582 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 MAT1AQ00266 395 aaKnown RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 DSC1Q08554 894 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ST3GAL4Q11206 333 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 ILKQ13418 452 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CAMK2DQ13557 499 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 IL18Q14116 193 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 SIM2Q14190 667 aaPredicted RBP4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 CSHL1Q14406 222 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 SPHARQ15513 63 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 MED22Q15528 200 aa4.19□□□□□ -1.74
PDLIM5-211ENST00000508531 RAB30Q15771 203 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms