RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PIP5KL1Q5T9C9 394 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 XAF1Q6GPH4 301 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 OPN5Q6U736 354 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 MDGA2Q7Z553 956 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 FAM26EQ8N5C1 309 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 CYB561A3Q8NBI2 242 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC2A12Q8TD20 617 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 APH1BQ8WW43 257 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 GHSRQ92847 366 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 BORCS8Q96FH0 119 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 MSLNLQ96KJ4 702 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 INTS14Q96SY0 518 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 NIPSNAP1Q9BPW8 284 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF251Q9BRH9 671 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 IER3IP1Q9Y5U9 82 aa6.85□□□□□ -1.31
UBE2D3-224ENST00000508474 KDM3BQ7LBC6 1761 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 LRP6O75581 1613 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 DCDC2BA2VCK2 349 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 LRIT2A6NDA9 550 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 GPR171O14626 319 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 KIAA0355O15063 1070 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 MT-ND4LP03901 98 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 SMIM6P0DI80 62 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 SELPP16109 830 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 CBLP22681 906 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 ELAVL4P26378 380 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 PSMB10P40306 273 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 RFX2P48378 723 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 CX3CR1P49238 355 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 RPS15AP62244 130 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 RANP62826 216 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 SPOCK1Q08629 439 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 TNK1Q13470 666 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 UPP1Q16831 310 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 FAM110CQ1W6H9 321 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 LCN10Q6JVE6 187 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 Q6ZVL8 140 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 CTU1Q7Z7A3 348 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 CDRT4Q8N9R6 151 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 OR6S1Q8NH40 331 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 OR1S1Q8NH92 325 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 AKR7LQ8NHP1 331 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 RLIMQ9NVW2 624 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 C2orf42Q9NWW7 574 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 CACNG4Q9UBN1 327 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 CLEC2DQ9UHP7 191 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 PLAGL1Q9UM63 463 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 FZD1Q9UP38 647 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 EXO1Q9UQ84 846 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 NUP188Q5SRE5 1749 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 IGKV6-21A0A0C4DH24 114 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 A0A0U1RQF3 1178 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 ARRDC5A6NEK1 342 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 OR2T1O43869 369 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 MPIG6BO95866 241 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 AKR1C2P52895 323 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 WNT7BP56706 349 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 H3F3AP84243 136 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 ACSM1Q08AH1 577 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 Q3ZCU0 254 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 GPR139Q6DWJ6 353 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 VASNQ6EMK4 673 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 LCTLQ6UWM7 567 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 VITQ6UXI7 678 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 IL34Q6ZMJ4 242 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 USP50Q70EL3 339 aaPredicted RBP6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 GPRIN1Q7Z2K8 1008 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 SMIM15Q7Z3B0 74 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 HMGN2P46Q86SG4 172 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 KCNRGQ8N5I3 272 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 SEC22AQ96IW7 307 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 RNF170Q96K19 258 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 TEPSINQ96N21 525 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 HCAR1Q9BXC0 346 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 RNF167Q9H6Y7 350 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 MVB12BQ9H7P6 319 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 ZNF442Q9H7R0 627 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 GJD2Q9UKL4 321 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 STRAPQ9Y3F4 350 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC22A7Q9Y694 548 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 PARP4Q9UKK3 1724 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 LINC00862A6NCI5 91 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 DVL2O14641 736 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 SIGLEC6O43699 453 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 PRSS56P0CW18 603 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 POU3F3P20264 500 aaPredicted RBP6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 LAP3P28838 519 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 SRPXP78539 464 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 SLC5A12Q1EHB4 618 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 ZMAT1Q5H9K5 638 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 HSD17B13Q7Z5P4 300 aaPredicted RBP6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 TRAPPC6BQ86SZ2 158 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 CELF5Q8N6W0 485 aaKnown RBP6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 OR5D14Q8NGL3 314 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 FAM213BQ8TBF2 198 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 PXYLP1Q8TE99 480 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 DPH7Q9BTV6 452 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 ZDHHC5Q9C0B5 715 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 TAF9BQ9HBM6 251 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 SLCO3A1Q9UIG8 710 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms