RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 GSK3BP49841 420 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ADARP55265 1226 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TLE3Q04726 772 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 BNIP2Q12982 314 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MADCAM1Q13477 382 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PDK3Q15120 406 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 DGUOKQ16854 277 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ALKBH6Q3KRA9 238 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CDKL4Q5MAI5 379 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 LIPJQ5W064 366 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ARSKQ6UWY0 536 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 RFLNAQ6ZTI6 216 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF551Q7Z340 670 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 DPY19L4Q7Z388 723 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF440Q8IYI8 595 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 LGI4Q8N135 537 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF441Q8N8Z8 693 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 GLIS1Q8NBF1 620 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ACTRT1Q8TDG2 376 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 MYEOVQ96EZ4 313 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 RRNAD1Q96FB5 475 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TXLNGYQ9BZA5 131 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TPK1Q9H3S4 243 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF442Q9H7R0 627 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 YAE1D1Q9NRH1 226 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 BORCS7-ASMTA0A0B4J1R7 106 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ELOVL7A1L3X0 281 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SLC22A20A6NK97 555 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 B8ZZF3 427 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PROB1E7EW31 1015 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 AQP7O14520 342 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SASH3O75995 380 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 GADD45GO95257 159 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 LGI1O95970 557 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CSN2P05814 226 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 C2P06681 752 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SPARCP09486 303 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CD3GP09693 182 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 NELFEP18615 380 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PEX2P28328 305 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 IL12AP29459 219 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PKLRP30613 574 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 FMO3P31513 532 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CDH11P55287 796 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ACTG1P63261 375 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 CLCQ05315 142 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ST3GAL3Q11203 375 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PLA2G7Q13093 441 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 GRB7Q14451 532 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 FGFBP1Q14512 234 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SIX1Q15475 284 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TGIF1Q15583 401 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 KCNJ8Q15842 424 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ATAD3CQ5T2N8 411 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 METRNLQ641Q3 311 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 LRFN4Q6PJG9 635 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PXKQ7Z7A4 578 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 DHDDSQ86SQ9 333 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 BIVMQ86UB2 503 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 LRRC34Q8IZ02 419 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 POU5F2Q8N7G0 328 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 NUP43Q8NFH3 380 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 BORCS7Q96B45 105 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 INTS12Q96CB8 462 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TMEM185BQ9H7F4 350 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 L2HGDHQ9H9P8 463 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 PLEKHA3Q9HB20 300 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 APMAPQ9HDC9 416 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 DNAJB12Q9NXW2 375 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 GAB2Q9UQC2 676 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 KCNIP3Q9Y2W7 256 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 LOC102725191A0A1B0GVB3 256 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 C5orf51A6NDU8 294 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 FBP2O00757 339 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TP73O15350 636 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ATP6V1G1O75348 118 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 METTL18O95568 372 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ANGPTL1O95841 491 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 GHRHP01286 108 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SFTPBP07988 381 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 F7P08709 466 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 GAAP10253 952 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 FCGR2AP12318 317 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 POU3F4P49335 361 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SNU13P55769 128 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TEKQ02763 1124 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZNF92Q03936 586 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 KLF1Q13351 362 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 RAB35Q15286 201 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 RAB11BQ15907 218 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 ZIK1Q3SY52 487 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 C9orf135Q5VTT2 229 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TTC27Q6P3X3 843 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 LARP4Q71RC2 724 aaKnown RBP eCLIP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 YRDCQ86U90 279 aaKnown RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 LSRQ86X29 649 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 BEST3Q8N1M1 668 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 SLC25A45Q8N413 288 aa2.74□□□□□ -1.97
NEDD4-208ENST00000508342 GLB1L3Q8NCI6 653 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-208ENST00000508342 TBC1D15Q8TC07 691 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms