RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 PRKAR1BP31321 381 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 PDK3Q15120 406 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 ZNF311Q5JNZ3 666 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 REEP3Q6NUK4 255 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 ZNF836Q6ZNA1 936 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 HMGN2P46Q86SG4 172 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 ABHD3Q8WU67 409 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 ROBO4Q8WZ75 1007 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 THOC1Q96FV9 657 aaKnown RBP17.74■□□□□ 0.43
SFXN1-209ENST00000508290 USB1Q9BQ65 265 aaKnown RBP17.74■□□□□ 0.43
SFXN1-209ENST00000508290 MED12LQ86YW9 2145 aa17.74■□□□□ 0.43
SFXN1-209ENST00000508290 CREBBPQ92793 2442 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 A0A1W2PNR3 127 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 PRORSD1PA6NEY8 169 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 ZNF724A8MTY0 619 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 EIF1BO60739 113 aaKnown RBP17.73■□□□□ 0.43
SFXN1-209ENST00000508290 VIMP08670 466 aaKnown RBP17.73■□□□□ 0.43
SFXN1-209ENST00000508290 SLC6A2P23975 617 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 ADSLP30566 484 aaPredicted RBP17.73■□□□□ 0.43
SFXN1-209ENST00000508290 ARFIP2P53365 341 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 KRTAP10-9P60411 292 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 CDK6Q00534 326 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 FAM27E3Q08E93 113 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 RBBP4Q09028 425 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 SNTB1Q13884 538 aaKnown RBP17.73■□□□□ 0.43
SFXN1-209ENST00000508290 MAPRE2Q15555 327 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 COQ5Q5HYK3 327 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 FBXW10Q5XX13 1052 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 WBP2NLQ6ICG8 309 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 DLEU7Q6UYE1 221 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 DHDDSQ86SQ9 333 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 MTDHQ86UE4 582 aaKnown RBP17.73■□□□□ 0.43
SFXN1-209ENST00000508290 VRK2Q86Y07 508 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 ADGRG3Q86Y34 549 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 LINC01560Q8TB33 94 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 NINJ1Q92982 152 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 ZNF607Q96SK3 696 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 HDHD5Q9BXW7 423 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 ADAM19Q9H013 955 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 FGFR1OP2Q9NVK5 253 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 EMC3Q9P0I2 261 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 SLAMF8Q9P0V8 285 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 OSGIN1Q9UJX0 560 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 CLEC4AQ9UMR7 237 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 TACC2O95359 2948 aa17.73■□□□□ 0.43
SFXN1-209ENST00000508290 TMED7-TICAM2A0A0A6YYA0 188 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 AP3D1O14617 1153 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 ADAM11O75078 769 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 SERPINB7O75635 380 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 NUDT7P0C024 238 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 TACR3P29371 465 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 RUNDC3AQ59EK9 446 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 RPS26P11Q5JNZ5 115 aaPredicted RBP17.72■□□□□ 0.43
SFXN1-209ENST00000508290 SLC30A8Q8IWU4 369 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 PIGXQ8TBF5 258 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 MAL2Q969L2 176 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 ANKRD27Q96NW4 1050 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 PSD2Q9BQI7 771 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 GPATCH1Q9BRR8 931 aaKnown RBP17.72■□□□□ 0.43
SFXN1-209ENST00000508290 MED18Q9BUE0 208 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 RLIMQ9NVW2 624 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 TMEM181Q9P2C4 612 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 GPR52Q9Y2T5 361 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 TMED7Q9Y3B3 224 aa17.72■□□□□ 0.43
SFXN1-209ENST00000508290 BBIP1A8MTZ0 92 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 GPR171O14626 319 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 SMAD9O15198 467 aaKnown RBP17.71■□□□□ 0.43
SFXN1-209ENST00000508290 SLC22A2O15244 555 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 CNOT4O95628 575 aaKnown RBP17.71■□□□□ 0.43
SFXN1-209ENST00000508290 NPPAP01160 153 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 FESP07332 822 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 PSMB1P20618 241 aaKnown RBP17.71■□□□□ 0.43
SFXN1-209ENST00000508290 CXCR1P25024 350 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 RASGEF1BQ0VAM2 473 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 HIPK4Q8NE63 616 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 CGREF1Q99674 301 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 SH3GL1Q99961 368 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 CPPED1Q9BRF8 314 aaPredicted RBP17.71■□□□□ 0.43
SFXN1-209ENST00000508290 POTEKPQ9BYX7 375 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 KLHL14Q9P2G3 628 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 ANGPT4Q9Y264 503 aa17.71■□□□□ 0.43
SFXN1-209ENST00000508290 IGKV3D-15A0A087WSY6 115 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 MDH1P40925 334 aaKnown RBP17.7■□□□□ 0.42
SFXN1-209ENST00000508290 ACAA2P42765 397 aaKnown RBP17.7■□□□□ 0.42
SFXN1-209ENST00000508290 SLC35A1P78382 337 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 NFYCQ13952 458 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 SCARB2Q14108 478 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 P2RY6Q15077 328 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 EXOC3L2Q2M3D2 409 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 ABLIM2Q6H8Q1 611 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 DHRS4L2Q6PKH6 230 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 SSX8Q7RTT4 187 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 TUSC5Q8IXB3 177 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 C11orf65Q8NCR3 313 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 NFKBIDQ8NI38 313 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 NAA11Q9BSU3 229 aaPredicted RBP17.7■□□□□ 0.42
SFXN1-209ENST00000508290 C12orf10Q9HB07 376 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 KLHL28Q9NXS3 571 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 PDZD2O15018 2839 aa17.7■□□□□ 0.42
SFXN1-209ENST00000508290 CRYGSP22914 178 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms