RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 QRSL1Q9H0R6 528 aaKnown RBP12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 ARMC7Q9H6L4 198 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 RMND5AQ9H871 391 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 FAIMQ9NVQ4 179 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 PNPOQ9NVS9 261 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 PARPBPQ9NWS1 579 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 TMEM181Q9P2C4 612 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 ING1Q9UK53 422 aaPredicted RBP12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 GPR45Q9Y5Y3 372 aa12.79□□□□□ -0.36
HMGCS1-203ENST00000507004 TMEM120BA0PK00 339 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 TMEM247A6NEH6 219 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 ZNF814B7Z6K7 855 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 H7C1Q1 480 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 RFXANKO14593 260 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 SNNO75324 88 aaPredicted RBP12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 PGM3O95394 542 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 ZCCHC18P0CG32 403 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 NR2F1P10589 423 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 IL7RP16871 459 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 GGT1P19440 569 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 RYKP34925 604 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 POLR2HP52434 150 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 ATP5J2P56134 94 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 UFM1P61960 85 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 SLC35A1P78382 337 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 CHRNEQ04844 493 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 MPP2Q14168 576 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 PPA1Q15181 289 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 PDCD4Q53EL6 469 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 FBXW9Q5XUX1 488 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 OR7E24Q6IFN5 339 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 RNF130Q86XS8 419 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 ANKRD42Q8N9B4 389 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 WDR60Q8WVS4 1066 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 APH1AQ96BI3 265 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 PIF1Q9H611 641 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 CTPS2Q9NRF8 586 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 ZIM2Q9NZV7 527 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 P2RX2Q9UBL9 471 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 MGAT4BQ9UQ53 548 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 NOSIPQ9Y314 301 aaKnown RBP12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 ABCA2Q9BZC7 2435 aa12.78□□□□□ -0.36
HMGCS1-203ENST00000507004 FREM1Q5H8C1 2179 aa12.77□□□□□ -0.36
HMGCS1-203ENST00000507004 IGHV3-15A0A0B4J1V0 119 aa12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 CENPVL1A0A0U1RR11 272 aa12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 CFAP73A6NFT4 308 aa12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 MRPL33O75394 65 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 SLC22A3O75751 556 aa12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 ALDOCP09972 364 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 PAX7P23759 505 aa12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 SLC1A3P43003 542 aa12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 IDH2P48735 452 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 FUT5Q11128 374 aa12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 ZNF75CPQ92670 426 aaPredicted RBP12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 MAELQ96JY0 434 aaKnown RBP12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 SLC38A1Q9H2H9 487 aa12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 RAD21L1Q9H4I0 556 aa12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 MANSC1Q9H8J5 431 aa12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 SLC9A8Q9Y2E8 581 aa12.77□□□□□ -0.37
HMGCS1-203ENST00000507004 A0A096LPI6 279 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 A0A1W2PP18 115 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 FAM234BA2RU67 622 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 OR5H1A6NKK0 313 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 KLF11O14901 512 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 CLOCKO15516 846 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 ANP32DO95626 131 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 RPS4Y1P22090 263 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 EPHA3P29320 983 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 IDUAP35475 653 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 CRISP3P54108 245 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 CASP9P55211 416 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 WDR4P57081 412 aaKnown RBP12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 COPZ1P61923 177 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 TGFBR3Q03167 851 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 ZNF672Q499Z4 452 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 LIN52Q52LA3 116 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 NXNQ6DKJ4 435 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 ALKBH2Q6NS38 261 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 KLHL17Q6TDP4 642 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 TMEM108Q6UXF1 575 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 ADGRG3Q86Y34 549 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 UBE2J2Q8N2K1 259 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 SMAP2Q8WU79 429 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 ZNF524Q96C55 264 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 ITCHQ96J02 903 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 ZNF300Q96RE9 604 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 ALG2Q9H553 416 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 BARX1Q9HBU1 254 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 ASB6Q9NWX5 421 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 TAS2R16Q9NYV7 291 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 MALT1Q9UDY8 824 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 PRSS50Q9UI38 385 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 ZNF232Q9UNY5 417 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 LAMP3Q9UQV4 416 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 MAGED1Q9Y5V3 778 aaPredicted RBP12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 USF3Q68DE3 2245 aa12.76□□□□□ -0.37
HMGCS1-203ENST00000507004 ZNF469Q96JG9 3925 aaPredicted RBP12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 TMED7-TICAM2A0A0A6YYA0 188 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 GOLGA8QA0A0J9YX86 632 aa12.75□□□□□ -0.37
HMGCS1-203ENST00000507004 CIB4A0PJX0 185 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms