RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 IGKV3D-15A0A087WSY6 115 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 UQCRHLA0A096LP55 91 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 FAM234BA2RU67 622 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF724A8MTY0 619 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 SULT2B1O00204 365 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 AP3D1O14617 1153 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 DNPH1O43598 174 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 DIAPH2O60879 1101 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 PMS2P2O95744 297 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 DBIP07108 87 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 FESP07332 822 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 TFPTP0C1Z6 253 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 NR2F1P10589 423 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 ETFAP13804 333 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 EDNRAP25101 427 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 FKBP2P26885 142 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 RYKP34925 604 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 OR3A2P47893 321 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 CLK1P49759 484 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 POLR2JP52435 117 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 CSNK2A1P68400 391 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 RASGEF1BQ0VAM2 473 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 FOXD4Q12950 439 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 P2RY6Q15077 328 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 PDK3Q15120 406 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 ACKR1Q16570 336 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 SFRP5Q5T4F7 317 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 MRPL2Q5T653 305 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 SEZ6L2Q6UXD5 910 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 Q6ZT83 130 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 MTDHQ86UE4 582 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 MIER2Q8N344 545 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 STEAP2Q8NFT2 490 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF563Q8TA94 476 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 WDR60Q8WVS4 1066 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 GTF2H4Q92759 462 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 VPS33AQ96AX1 596 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 AURKBQ96GD4 344 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 ITCHQ96J02 903 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 ARL5BQ96KC2 179 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF300Q96RE9 604 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 TMEM204Q9BSN7 226 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 HDHD5Q9BXW7 423 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 PAIP1Q9H074 479 aaKnown RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 RMND5AQ9H871 391 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 TPT1P8Q9HAU6 139 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 SLC52A3Q9NQ40 469 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 P2RX2Q9UBL9 471 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 PRDM4Q9UKN5 801 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 HDGFL3Q9Y3E1 203 aa8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 SPIN1Q9Y657 262 aaPredicted RBP8.05□□□□□ -1.12
PDLIM5-209ENST00000506632 DSCAMO60469 2012 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 ZFHX3Q15911 3703 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 CDHR4A6H8M9 788 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF716A6NP11 495 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 CNOT4O95628 575 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 BMP2P12643 396 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 IL7RP16871 459 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 COX5AP20674 150 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 FPR1P21462 350 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 ACAA2P42765 397 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 SLC1A3P43003 542 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 HTR3AP46098 478 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 IDH2P48735 452 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 IDH3AP50213 366 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 MAP2K6P52564 334 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 SLC16A1P53985 500 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 CRISP3P54108 245 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 NR1H2P55055 460 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 DSTNP60981 165 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 PPP2R2AP63151 447 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 H3F3AP84243 136 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 EPS8Q12929 822 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 ITGADQ13349 1161 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 GNA13Q14344 377 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 LRIF1Q5T3J3 769 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 RNF220Q5VTB9 566 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF836Q6ZNA1 936 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 C20orf204Q6ZNR8 217 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 FUNDC1Q8IVP5 155 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 PEX5LQ8IYB4 626 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 ZNF440Q8IYI8 595 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 LRRC75A-AS1Q8N1F1 130 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 WFDC11Q8NEX6 87 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 LRRC8CQ8TDW0 803 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 SLC38A5Q8WUX1 472 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 STON2Q8WXE9 905 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 S100PBPQ96BU1 408 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 EBF4Q9BQW3 602 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 CCDC28BQ9BUN5 200 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 OR11A1Q9GZK7 315 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 ADAM19Q9H013 955 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 TCF7L2Q9NQB0 619 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 THUMPD1Q9NXG2 353 aaKnown RBP8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 CALML5Q9NZT1 146 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 OSGIN1Q9UJX0 560 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 TRAPPC4Q9Y296 219 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 CHST2Q9Y4C5 530 aa8.04□□□□□ -1.12
PDLIM5-209ENST00000506632 PCDHB14Q9Y5E9 798 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms