RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 SLC25A43Q8WUT9 341 aaPredicted RBP6.53□□□□□ -1.36
GYPB-206ENST00000506516 OSTF1Q92882 214 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 SLC35B4Q969S0 331 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 REXO5Q96IC2 774 aaKnown RBP6.53□□□□□ -1.36
GYPB-206ENST00000506516 KLHL15Q96M94 604 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 NPAS1Q99742 590 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 PINK1Q9BXM7 581 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 UCK2Q9BZX2 261 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 IKZF5Q9H5V7 419 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 TMEM185BQ9H7F4 350 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 EVA1AQ9H8M9 152 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 RLIMQ9NVW2 624 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 CLCF1Q9UBD9 225 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 ARL2BPQ9Y2Y0 163 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 ZNF175Q9Y473 711 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 EXPH5Q8NEV8 1989 aa6.53□□□□□ -1.36
GYPB-206ENST00000506516 FLNCQ14315 2725 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 A0A0J9YW62 118 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 FAM90A27PA6NNH2 459 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 KDM4EB2RXH2 506 aaPredicted RBP6.52□□□□□ -1.37
GYPB-206ENST00000506516 H0YC42 278 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 M0QX08 132 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 AIM2O14862 343 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 EFNA2O43921 213 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 CXCL13O43927 109 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 TGM6O95932 706 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 PLGP00747 810 aaPredicted RBP6.52□□□□□ -1.37
GYPB-206ENST00000506516 IFNA14P01570 189 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 CRHP06850 196 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 GKN3PP0CG01 181 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 IL11P20809 199 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 CXCR1P25024 350 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 AQP1P29972 269 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 PRDX6P30041 224 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 POLR2HP52434 150 aaKnown RBP6.52□□□□□ -1.37
GYPB-206ENST00000506516 ZNF136P52737 540 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 TPD52P55327 224 aaPredicted RBP6.52□□□□□ -1.37
GYPB-206ENST00000506516 DLX5P56178 289 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 CSNK2A1P68400 391 aaPredicted RBP6.52□□□□□ -1.37
GYPB-206ENST00000506516 EPS8Q12929 822 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 VEZF1Q14119 521 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 SELPLGQ14242 412 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 VMACQ2NL98 169 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 GKAP1Q5VSY0 366 aaPredicted RBP6.52□□□□□ -1.37
GYPB-206ENST00000506516 WBP2NLQ6ICG8 309 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 ERICH5Q6P6B1 374 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 NET1Q7Z628 596 aaPredicted RBP6.52□□□□□ -1.37
GYPB-206ENST00000506516 ARPINQ7Z6K5 226 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 PATL1Q86TB9 770 aaKnown RBP6.52□□□□□ -1.37
GYPB-206ENST00000506516 PTOV1Q86YD1 416 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 ARMC8Q8IUR7 673 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 LIX1LQ8IVB5 337 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 MCEMP1Q8IX19 187 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 C10orf111Q8N326 155 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 CLIP4Q8N3C7 705 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 CADM2Q8N3J6 435 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 POU5F2Q8N7G0 328 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 C9orf106Q8NAJ2 232 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 OR10D3Q8NH80 312 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 RASSF5Q8WWW0 418 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 CPNE4Q96A23 557 aaPredicted RBP6.52□□□□□ -1.37
GYPB-206ENST00000506516 INTS12Q96CB8 462 aaKnown RBP6.52□□□□□ -1.37
GYPB-206ENST00000506516 DDIT4LQ96D03 193 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 RCN3Q96D15 328 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 ZNF845Q96IR2 970 aaPredicted RBP6.52□□□□□ -1.37
GYPB-206ENST00000506516 ADGRG7Q96K78 797 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 LRRC37BQ96QE4 947 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 CCT8L2Q96SF2 557 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 KLHDC3Q9BQ90 382 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 SLC39A3Q9BRY0 314 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 SFXN3Q9BWM7 321 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 PIGMQ9H3S5 423 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 PIF1Q9H611 641 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 RNF122Q9H9V4 155 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 CTPS2Q9NRF8 586 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 GLRX2Q9NS18 164 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 FAM53CQ9NYF3 392 aa6.52□□□□□ -1.37
GYPB-206ENST00000506516 POLEQ07864 2286 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 TMED7-TICAM2A0A0A6YYA0 188 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 NKX2-6A6NCS4 301 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 SULT2B1O00204 365 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 SYT5O00445 386 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 AP3D1O14617 1153 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 ZNF208O43345 1280 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 BCAS1O75363 584 aaPredicted RBP6.51□□□□□ -1.37
GYPB-206ENST00000506516 PRKD3O94806 890 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 MFN2O95140 757 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 FAM107AO95990 144 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 C8BP07358 591 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 TFPIP10646 304 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 COX6B1P14854 86 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 CCNA2P20248 432 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 ENPP1P22413 925 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 COL8A1P27658 744 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 TACR3P29371 465 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 PEX19P40855 299 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 ACAA2P42765 397 aaKnown RBP6.51□□□□□ -1.37
GYPB-206ENST00000506516 GSK3AP49840 483 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 ASCL1P50553 236 aa6.51□□□□□ -1.37
GYPB-206ENST00000506516 GZMMP51124 257 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms