RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 TRIM3O75382 744 aaPredicted RBP2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 SCGNO76038 276 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 SEMA4FO95754 770 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 SNAI1O95863 264 aaPredicted RBP2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 IGHV3-9P01782 118 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 WNT2P09544 360 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 DBTP11182 482 aaKnown RBP2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 PVRP15151 417 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 PGCP20142 388 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 TPSB2P20231 275 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 CDH5P33151 784 aaPredicted RBP2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 BDKRB1P46663 353 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 GNPDA1P46926 289 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 TDO2P48775 406 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 GSK3BP49841 420 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 AP3M2P53677 418 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 CCL23P55773 120 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 OTUD4Q01804 1114 aaKnown RBP2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 FGL1Q08830 312 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 FCHO2Q0JRZ9 810 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 TPSAB1Q15661 275 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 CYP51A1Q16850 503 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 TMEM44Q2T9K0 475 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 GGTA1PQ4G0N0 100 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 C10orf120Q5SQS8 335 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 C9orf66Q5T8R8 295 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 MEDAGQ5VYS4 303 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 OR8G2PQ6IF36 304 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 FAM71F2Q6NXP2 309 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 FAAP20Q6NZ36 180 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 RFWD3Q6PCD5 774 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 CXCL17Q6UXB2 119 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 STAC2Q6ZMT1 411 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 PRSS48Q7RTY5 328 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 TMCO2Q7Z6W1 182 aaPredicted RBP2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 IFNEQ86WN2 208 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 BPIFB2Q8N4F0 458 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 WDSUB1Q8N9V3 476 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 STXBP6Q8NFX7 210 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 FLVCR1-AS1Q8TAF5 88 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 AENQ8WTP8 325 aaKnown RBP2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 IL1F10Q8WWZ1 152 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 FAM3CQ92520 227 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 CNDP1Q96KN2 507 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 TGM7Q96PF1 710 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 SLC6A7Q99884 636 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 SLC39A3Q9BRY0 314 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 TMEM43Q9BTV4 400 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 CCDC28BQ9BUN5 200 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 AMBNQ9NP70 447 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 EXOSC3Q9NQT5 275 aaKnown RBP2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 FAM120CQ9NX05 1096 aaKnown RBP2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 AIPL1Q9NZN9 384 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 PIPOXQ9P0Z9 390 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 TBX21Q9UL17 535 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 RNF24Q9Y225 148 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 NTNG1Q9Y2I2 539 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF236Q9UL36 1845 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 CHD9Q3L8U1 2897 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 BDP1A6H8Y1 2624 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZBED9Q6R2W3 1325 aa2.6□□□□□ -1.99
TRAPPC11-205ENST00000506426 FRMPD3Q5JV73 1810 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 DNAH12Q6ZR08 3092 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 CDK5RAP2Q96SN8 1893 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 IGHV3OR16-12A0A075B7B8 117 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 IGHV3OR16-10A0A075B7F0 116 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 TRAV26-1A0A087WT03 109 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 IGHV3-16A0A0C4DH30 117 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 A0A1B0GTH9 108 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 EPOPA6NHQ4 379 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZSCAN5BA6NJL1 495 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 F5H6K3 240 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 H7C423 109 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 OR7A17O14581 309 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZG16O60844 167 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 N4BP1O75113 896 aaKnown RBP2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 TSC22D2O75157 780 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 LRATO95237 230 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 ASGR1P07306 291 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 CAPN1P07384 714 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 H2AFZP0C0S5 128 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 H2BFMP0C1H6 154 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 RPL4P36578 427 aaKnown RBP2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 HPCAL1P37235 193 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 GRIA1P42261 906 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 ATP5IP56385 69 aaPredicted RBP2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 KLRC3Q07444 240 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 IL18R1Q13478 541 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 MXD4Q14582 209 aaPredicted RBP2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 ABRAXAS2Q15018 415 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 MICAQ29983 383 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 C17orf58Q2M2W7 97 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 SNAI3Q3KNW1 292 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 KCTD21Q4G0X4 260 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF506Q5JVG8 444 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 LGSNQ5TDP6 509 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZC2HC1BQ5TFG8 222 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZSCAN25Q6NSZ9 544 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms