RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 TACO1Q9BSH4 297 aaKnown RBP12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 GSX2Q9BZM3 304 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 OR11A1Q9GZK7 315 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 MANSC1Q9H8J5 431 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 TMBIM4Q9HC24 238 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 EXOSC3Q9NQT5 275 aaKnown RBP12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZNF701Q9NV72 531 aaPredicted RBP12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 LIPT1Q9Y234 373 aa12.74□□□□□ -0.37
CDC42SE2-209ENST00000506419 IGKV3D-15A0A087WSY6 115 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 TRIM64A6NGJ6 449 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 TRIM64BA6NI03 449 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 TRPC5OSA6NMA1 111 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZNF716A6NP11 495 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 H7C1Q1 480 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 SLC22A3O75751 556 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 LYZL6O75951 148 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 LY6G6DO95868 133 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 RPS4Y1P22090 263 aaKnown RBP12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 IGHV1-2P23083 117 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 IL32P24001 234 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 ADSLP30566 484 aaPredicted RBP12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 PDK3Q15120 406 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 PDCD4Q53EL6 469 aaKnown RBP12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 NXNQ6DKJ4 435 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 ADAM5Q6NVV9 412 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 GRINAQ7Z429 371 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 GALNT5Q7Z7M9 940 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 PIWIL2Q8TC59 973 aaKnown RBP12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 COX4I2Q96KJ9 171 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 CHRNA9Q9UGM1 479 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 OSGIN1Q9UJX0 560 aa12.73□□□□□ -0.37
CDC42SE2-209ENST00000506419 DSCAMO60469 2012 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 TMED7-TICAM2A0A0A6YYA0 188 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 TMEM72A0PK05 275 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 SLCO1B7G3V0H7 640 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 PGM3O95394 542 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 PMS2P2O95744 297 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 NR2F1P10589 423 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 IMPDH2P12268 514 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 FOXG1P55316 489 aaPredicted RBP12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 CSNK2A1P68400 391 aaPredicted RBP12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 H3F3AP84243 136 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 CAPRIN1Q14444 709 aaKnown RBP12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 GTDC1Q4AE62 458 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 ATG16L1Q676U5 607 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 ABLIM2Q6H8Q1 611 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 CLEC9AQ6UXN8 241 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 TRIML2Q8N7C3 387 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 GLB1L3Q8NCI6 653 aaPredicted RBP12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 SLC25A43Q8WUT9 341 aaPredicted RBP12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZBTB18Q99592 522 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 ADAM19Q9H013 955 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 RLIMQ9NVW2 624 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 TMED7Q9Y3B3 224 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 HDGFL3Q9Y3E1 203 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 CSPG4Q6UVK1 2322 aa12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 RAI1Q7Z5J4 1906 aaPredicted RBP12.72□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZC3H12DA2A288 527 aaKnown RBP12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 RFXANKO14593 260 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 SMAD7O15105 426 aaKnown RBP12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 IGHV3-9P01782 118 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 IL6P05231 212 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 SOD3P08294 240 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 TFPTP0C1Z6 253 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 DANCRP0C864 163 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 ETFAP13804 333 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 TACR3P29371 465 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 CLK1P49759 484 aaKnown RBP12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 OR2B6P58173 313 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 EPS8Q12929 822 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 VRK2Q86Y07 508 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 CMIPQ8IY22 773 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZNF100Q8IYN0 542 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 ZNF433Q8N7K0 673 aaPredicted RBP12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 OR9I1Q8NGQ6 314 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 TMEM171Q8WVE6 324 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 SDR39U1Q9NRG7 319 aaPredicted RBP12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 TMEM181Q9P2C4 612 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 LAMP3Q9UQV4 416 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 TRAPPC4Q9Y296 219 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 CHST2Q9Y4C5 530 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 RNF115Q9Y4L5 304 aa12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 SPIN1Q9Y657 262 aaPredicted RBP12.71□□□□□ -0.37
CDC42SE2-209ENST00000506419 FN1P02751 2386 aaKnown RBP12.71□□□□□ -0.38
CDC42SE2-209ENST00000506419 CADP27708 2225 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 OVOL3O00110 214 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 CLOCKO15516 846 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 CNOT4O95628 575 aaKnown RBP12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 KRT75O95678 551 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 DBIP07108 87 aaKnown RBP12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 CD3EP07766 207 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 GKN3PP0CG01 181 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 ZCCHC18P0CG32 403 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 IDO1P14902 403 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 IL7RP16871 459 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 COX5AP20674 150 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 FKBP2P26885 142 aaKnown RBP12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 ACAA2P42765 397 aaKnown RBP12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 SLC1A3P43003 542 aa12.7□□□□□ -0.38
CDC42SE2-209ENST00000506419 TXNL4AP83876 142 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms