RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 DEF8Q6ZN54 512 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 PLEKHM3Q6ZWE6 761 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 ASRGL1Q7L266 308 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 GRINAQ7Z429 371 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 RBM45Q8IUH3 476 aaKnown RBP9.05□□□□□ -0.96
NUP54-203ENST00000504173 OR4D11Q8NGI4 311 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 OR6T1Q8NGN1 323 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 GEMIN6Q8WXD5 167 aaKnown RBP9.05□□□□□ -0.96
NUP54-203ENST00000504173 SMPDL3BQ92485 455 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 ZNF524Q96C55 264 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 MCHR1Q99705 422 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 NPAS1Q99742 590 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 WFDC6Q9BQY6 131 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 UGT2B28Q9BY64 529 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 TRIM2Q9C040 744 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 TMEM27Q9HBJ8 222 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 SERINC1Q9NRX5 453 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 SELENONQ9NZV5 590 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 STOML1Q9UBI4 398 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 TNFRSF10DQ9UBN6 386 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 PRDM4Q9UKN5 801 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 ACAD8Q9UKU7 415 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 CAMK2AQ9UQM7 478 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 ZNF469Q96JG9 3925 aaPredicted RBP9.05□□□□□ -0.96
NUP54-203ENST00000504173 DNAJC13O75165 2243 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 A0A1B0GWA3 101 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 OR14I1A6ND48 311 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 CPSF4LA6NMK7 179 aaKnown RBP9.04□□□□□ -0.96
NUP54-203ENST00000504173 ETV2O00321 342 aaPredicted RBP9.04□□□□□ -0.96
NUP54-203ENST00000504173 BCKDKO14874 412 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 ZNHIT1O43257 154 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 SEC14L5O43304 696 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 FMO6PO60774 539 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 CIB2O75838 187 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 PRKD3O94806 890 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 NTN1O95631 604 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 IFNW1P05000 195 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 TPOP07202 933 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 PEPDP12955 493 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 PSMA4P25789 261 aaKnown RBP9.04□□□□□ -0.96
NUP54-203ENST00000504173 HTR2AP28223 471 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 TACR3P29371 465 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 APOBEC1P41238 236 aaKnown RBP9.04□□□□□ -0.96
NUP54-203ENST00000504173 STARP49675 285 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 POLR2HP52434 150 aaKnown RBP9.04□□□□□ -0.96
NUP54-203ENST00000504173 DLX5P56178 289 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 CRYZQ08257 329 aaKnown RBP9.04□□□□□ -0.96
NUP54-203ENST00000504173 SELENBP1Q13228 472 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 FLOT2Q14254 428 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 OR1Q1Q15612 314 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 NPTX1Q15818 432 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 ZSCAN26Q16670 478 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.04□□□□□ -0.96
NUP54-203ENST00000504173 ENTPD8Q5MY95 495 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 DCST1Q5T197 706 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 WLSQ5T9L3 541 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 VASNQ6EMK4 673 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 FGD2Q7Z6J4 655 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 YTHDF3Q7Z739 585 aaKnown RBP9.04□□□□□ -0.96
NUP54-203ENST00000504173 ZNF295-AS1Q8N0V1 137 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 ATP6V1C2Q8NEY4 427 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 RNF217Q8TC41 542 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 PYURFQ96I23 114 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 TIMP4Q99727 224 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 PRR14Q9BWN1 585 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 TMEM185BQ9H7F4 350 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 CTPS2Q9NRF8 586 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 SLC7A8Q9UHI5 535 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 POMPQ9Y244 141 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 ZNF337Q9Y3M9 751 aa9.04□□□□□ -0.96
NUP54-203ENST00000504173 MED12Q93074 2177 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 TMED7-TICAM2A0A0A6YYA0 188 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 A0A0B4J2E0 115 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 A0A1B0GX12 115 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 GJE1A6NN92 205 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 H0Y3Z8 333 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 PRRG2O14669 202 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 ACOT8O14734 319 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 LRRTM2O43300 516 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 TPST2O60704 377 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 SLC19A2O60779 497 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 ZG16O60844 167 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 ZNF708P17019 499 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 CCNA2P20248 432 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 IL11P20809 199 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 CXCR1P25024 350 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 IFNA8P32881 189 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 SFTPDP35247 375 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 LHX2P50458 406 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 TAS2R41P59536 307 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 RAC1P63000 192 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 SRYQ05066 204 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 C3AR1Q16581 482 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 ALG10BQ5I7T1 473 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 C1orf146Q5VVC0 180 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 C3orf33Q6P1S2 294 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 ZNF613Q6PF04 617 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 CXXC5Q7LFL8 322 aaKnown RBP9.03□□□□□ -0.96
NUP54-203ENST00000504173 CD163Q86VB7 1156 aa9.03□□□□□ -0.96
NUP54-203ENST00000504173 SPATA24Q86W54 205 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms