RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 MRPL53Q96EL3 112 aaKnown RBP4.36□□□□□ -1.71
NIPBL-203ENST00000503274 EEF2KMTQ96G04 330 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 C5orf30Q96GV9 206 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 PIWIL1Q96J94 861 aaKnown RBP4.36□□□□□ -1.71
NIPBL-203ENST00000503274 HSFY1Q96LI6 401 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 FUNDC2Q9BWH2 189 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 GPR174Q9BXC1 333 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 DCLRE1BQ9H816 532 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 Q9HAA7 133 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 IL1RL2Q9HB29 575 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 ZCCHC3Q9NUD5 404 aaKnown RBP4.36□□□□□ -1.71
NIPBL-203ENST00000503274 ACOXLQ9NUZ1 547 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 TAS2R16Q9NYV7 291 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 SCML1Q9UN30 329 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 NAALAD2Q9Y3Q0 740 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 NEUROG3Q9Y4Z2 214 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 MYO16Q9Y6X6 1858 aa4.36□□□□□ -1.71
NIPBL-203ENST00000503274 FASNP49327 2511 aaKnown RBP4.36□□□□□ -1.71
NIPBL-203ENST00000503274 CEP192Q8TEP8 1941 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 PLXND1Q9Y4D7 1925 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 M0QYV0 167 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 LRRTM2O43300 516 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 DFNA5O60443 496 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 TBL1XO60907 577 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 RTN2O75298 545 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 ZNF253O75346 499 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 IGLV3-19P01714 112 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 IGHG3P01860 377 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 APOEP02649 317 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 THY1P04216 161 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 SLC2A3P11169 496 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 CASP3P42574 277 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 TPMTP51580 245 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 GEMP55040 296 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 UCP2P55851 309 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 DAOAP59103 153 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 NAAAQ02083 359 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 CRMP1Q14194 572 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 KRT31Q15323 416 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 SLC22A6Q4U2R8 563 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 RHBDD2Q6NTF9 364 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 ZNF584Q8IVC4 421 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 OR4A16Q8NH70 328 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 SETD7Q8WTS6 366 aaKnown RBP4.35□□□□□ -1.71
NIPBL-203ENST00000503274 SERPINB11Q96P15 392 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 LHX5Q9H2C1 402 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 SGK2Q9HBY8 427 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 AMBNQ9NP70 447 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 SEC14L4Q9UDX3 406 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 GGA2Q9UJY4 613 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 STOML2Q9UJZ1 356 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 DIMT1Q9UNQ2 313 aaKnown RBP4.35□□□□□ -1.71
NIPBL-203ENST00000503274 SPEGQ15772 3267 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 WDFY3Q8IZQ1 3526 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 KIAA1549LQ6ZVL6 1849 aa4.35□□□□□ -1.71
NIPBL-203ENST00000503274 TRAV9-2A0A087WT02 112 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 SPAARA0A1B0GVQ0 90 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 E7ENQ6 273 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 SLC28A1O00337 649 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 FCER2P06734 321 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 SFTPBP07988 381 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 C21orf59P57076 290 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 HERV-K104P63124 156 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 C17orf67Q0P5P2 114 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 TPD52L1Q16890 204 aaPredicted RBP4.34□□□□□ -1.71
NIPBL-203ENST00000503274 CNPY1Q3B7I2 92 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 ODF2Q5BJF6 829 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 C1QTNF12Q5T7M4 302 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 PMF1Q6P1K2 205 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 B3GLCTQ6Y288 498 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 ZNF600Q6ZNG1 722 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 NAXDQ8IW45 347 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 LINC00518Q8N0U6 118 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 ATP6V0D2Q8N8Y2 350 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 RELL2Q8NC24 303 aaPredicted RBP4.34□□□□□ -1.71
NIPBL-203ENST00000503274 PSMA8Q8TAA3 256 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 NELFBQ8WX92 580 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 NDRG1Q92597 394 aaKnown RBP4.34□□□□□ -1.71
NIPBL-203ENST00000503274 MCCC1Q96RQ3 725 aaPredicted RBP4.34□□□□□ -1.71
NIPBL-203ENST00000503274 OMDQ99983 421 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 TMEM245Q9H330 911 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 THAP9Q9H5L6 903 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 DNAJC11Q9NVH1 559 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 RCOR3Q9P2K3 495 aaPredicted RBP4.34□□□□□ -1.71
NIPBL-203ENST00000503274 CIDEBQ9UHD4 219 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 RNF24Q9Y225 148 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 ATG4BQ9Y4P1 393 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 SNX5Q9Y5X3 404 aa4.34□□□□□ -1.71
NIPBL-203ENST00000503274 ASXL3Q9C0F0 2248 aa4.34□□□□□ -1.72
NIPBL-203ENST00000503274 APC2O95996 2303 aa4.34□□□□□ -1.72
NIPBL-203ENST00000503274 KALRNO60229 2985 aa4.34□□□□□ -1.72
NIPBL-203ENST00000503274 IGSF10Q6WRI0 2623 aa4.33□□□□□ -1.72
NIPBL-203ENST00000503274 URB1O60287 2271 aaKnown RBP4.33□□□□□ -1.72
NIPBL-203ENST00000503274 A0A1W2PQ72 361 aa4.33□□□□□ -1.72
NIPBL-203ENST00000503274 FAM47DPA6NHR8 397 aa4.33□□□□□ -1.72
NIPBL-203ENST00000503274 F5H5T6 163 aa4.33□□□□□ -1.72
NIPBL-203ENST00000503274 YKT6O15498 198 aa4.33□□□□□ -1.72
NIPBL-203ENST00000503274 IGLV3-27P01718 113 aa4.33□□□□□ -1.72
NIPBL-203ENST00000503274 HLA-EP13747 358 aa4.33□□□□□ -1.72
NIPBL-203ENST00000503274 CCR1P32246 355 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms