RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 MCCC2Q9HCC0 563 aa20.09■□□□□ 0.81
PTPN13-205ENST00000502971 H2AFY2Q9P0M6 372 aaPredicted RBP20.09■□□□□ 0.81
PTPN13-205ENST00000502971 PTRH2Q9Y3E5 179 aaKnown RBP20.09■□□□□ 0.81
PTPN13-205ENST00000502971 IGKV1D-42A0A075B6H8 117 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 OR7A10O76100 309 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 NADKO95544 446 aaPredicted RBP20.08■□□□□ 0.81
PTPN13-205ENST00000502971 TGFBR2P37173 567 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 P2RX1P51575 399 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 GAS1P54826 345 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 FOXK2Q01167 660 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 PCOLCEQ15113 449 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 DCUN1D5Q9BTE7 237 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 MND1Q9BWT6 205 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 CMC2Q9NRP2 79 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 TAS2R16Q9NYV7 291 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 ZNF337Q9Y3M9 751 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 B3GALT1Q9Y5Z6 326 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 HEATR5AQ86XA9 2040 aa20.08■□□□□ 0.81
PTPN13-205ENST00000502971 EP300Q09472 2414 aaPredicted RBP20.08■□□□□ 0.8
PTPN13-205ENST00000502971 M0R3G1 203 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 WWP2O00308 870 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 SCO2O43819 266 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 KLF7O75840 302 aaPredicted RBP20.07■□□□□ 0.8
PTPN13-205ENST00000502971 NDUFB2O95178 105 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 SLC2A10O95528 541 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 UMODP07911 640 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 MST1P26927 711 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 ITPKBP27987 946 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 HTR1FP30939 366 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 LIPAP38571 399 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 INSM1Q01101 510 aaPredicted RBP20.07■□□□□ 0.8
PTPN13-205ENST00000502971 ARMCX4Q5H9R4 360 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 C3orf38Q5JPI3 329 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 C16orf47Q6ZP98 133 aaPredicted RBP20.07■□□□□ 0.8
PTPN13-205ENST00000502971 CXXC5Q7LFL8 322 aaKnown RBP20.07■□□□□ 0.8
PTPN13-205ENST00000502971 NUP54Q7Z3B4 507 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 GID4Q8IVV7 300 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 PROKR2Q8NFJ6 384 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 OR2Y1Q8NGV0 311 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 THAP3Q8WTV1 239 aaPredicted RBP20.07■□□□□ 0.8
PTPN13-205ENST00000502971 LIPHQ8WWY8 451 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 TTC9Q92623 222 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 HGDQ93099 445 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 HINT3Q9NQE9 182 aaKnown RBP20.07■□□□□ 0.8
PTPN13-205ENST00000502971 MYOTQ9UBF9 498 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 SLC22A1O15245 554 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 CDC40O60508 579 aaKnown RBP eCLIP20.07■□□□□ 0.8
PTPN13-205ENST00000502971 TACR3P29371 465 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 MED22Q15528 200 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 STPG1Q5TH74 334 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 SLC46A3Q7Z3Q1 461 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 LSRQ86X29 649 aaPredicted RBP20.07■□□□□ 0.8
PTPN13-205ENST00000502971 CPOQ8IVL8 374 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 NANOGP1Q8N7R0 232 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 B4GALNT2Q8NHY0 566 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 ELP5Q8TE02 316 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 ZNF700Q9H0M5 742 aa20.07■□□□□ 0.8
PTPN13-205ENST00000502971 ZNF354AO60765 605 aaPredicted RBP20.06■□□□□ 0.8
PTPN13-205ENST00000502971 PEPDP12955 493 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 HK1P19367 917 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 ETV5P41161 510 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 TMED10P49755 219 aaKnown RBP20.06■□□□□ 0.8
PTPN13-205ENST00000502971 FBXW4P57775 412 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 ISXQ2M1V0 245 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 CCDC157Q569K6 752 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 CDCP2Q5VXM1 449 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 ARHGAP11AQ6P4F7 1023 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 RAB11FIP2Q7L804 512 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 SLC22A8Q8TCC7 542 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 LIN37Q96GY3 246 aaPredicted RBP20.06■□□□□ 0.8
PTPN13-205ENST00000502971 DEPDC7Q96QD5 511 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 OR5M11Q96RB7 305 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 TAAR9Q96RI9 348 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 MGLLQ99685 303 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 DDA1Q9BW61 102 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 DEFB126Q9BYW3 111 aa20.06■□□□□ 0.8
PTPN13-205ENST00000502971 LSM2Q9Y333 95 aaKnown RBP20.06■□□□□ 0.8
PTPN13-205ENST00000502971 IGHV1-45A0A0A0MS14 117 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.05■□□□□ 0.8
PTPN13-205ENST00000502971 STK17BO94768 372 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 IGHEP01854 428 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 GP1BBP13224 206 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 MYL12AP19105 171 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 NR4A1P22736 598 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 LIMK1P53667 647 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 AQP6Q13520 282 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 EXT1Q16394 746 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 SLC35F1Q5T1Q4 408 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 PIP4P1Q86T03 277 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 RNF138Q8WVD3 245 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 CHCHD3Q9NX63 227 aaKnown RBP20.05■□□□□ 0.8
PTPN13-205ENST00000502971 CLEC2DQ9UHP7 191 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 EXOSC1Q9Y3B2 195 aaKnown RBP20.05■□□□□ 0.8
PTPN13-205ENST00000502971 TEX51A0A1B0GUA7 166 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 RIIAD1A6NNX1 92 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 ADAM10O14672 748 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 PPP1R3DO95685 299 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 NUDT14O95848 222 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 BCL10O95999 233 aa20.05■□□□□ 0.8
PTPN13-205ENST00000502971 IFNGP01579 166 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms