RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-218	ENST00000502357	SLC17A1	Q14916	467 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	EFNB3	Q15768	340 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	ADIPOQ	Q15848	244 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	C1QTNF12	Q5T7M4	302 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	C9orf135	Q5VTT2	229 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	OR5D16	Q8NGK9	328 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	ACMSD	Q8TDX5	336 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	ADAMTS15	Q8TE58	950 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	COQ8B	Q96D53	544 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	OR7D2	Q96RA2	312 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	IQCG	Q9H095	443 aa	Known RBP	11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	C12orf65	Q9H3J6	166 aa	Known RBP	11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	CTPS2	Q9NRF8	586 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	AMDHD2	Q9Y303	409 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357	DNAJC15	Q9Y5T4	150 aa		11.01	□□□□□ -0.65
LMNA-218	ENST00000502357		A0A1W2PPM1	405 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	TMEM129	A0AVI4	362 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	GPR171	O14626	319 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	SCAMP2	O15127	329 aa	Known RBP	11	□□□□□ -0.65
LMNA-218	ENST00000502357	DNPH1	O43598	174 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	MRPL33	O75394	65 aa	Known RBP	11	□□□□□ -0.65
LMNA-218	ENST00000502357	ABHD2	P08910	425 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	IMPDH2	P12268	514 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	BMP4	P12644	408 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	CDH15	P55291	814 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	NAA20	P61599	178 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	RPL38	P63173	70 aa	Known RBP	11	□□□□□ -0.65
LMNA-218	ENST00000502357	MERTK	Q12866	999 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	RIN1	Q13671	783 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	LIPM	Q5VYY2	423 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	C8orf74	Q6P047	294 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	C12orf54	Q6X4T0	127 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	PIGX	Q8TBF5	258 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11	□□□□□ -0.65
LMNA-218	ENST00000502357	ZFAND2B	Q8WV99	257 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	OR5P2	Q8WZ92	322 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	HPS1	Q92902	700 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	ZG16B	Q96DA0	208 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	DNAJA3	Q96EY1	480 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	OR11A1	Q9GZK7	315 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	ZNF350	Q9GZX5	532 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	SEC61A2	Q9H9S3	476 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	OXSM	Q9NWU1	459 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	CRNN	Q9UBG3	495 aa	Predicted RBP	11	□□□□□ -0.65
LMNA-218	ENST00000502357	GIMAP2	Q9UG22	337 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	CHRNA9	Q9UGM1	479 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	FKBP7	Q9Y680	259 aa		11	□□□□□ -0.65
LMNA-218	ENST00000502357	EXOC1L	A0A1B0GW35	172 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	TMEM89	A2RUT3	159 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	PLIN3	O60664	434 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	PDE5A	O76074	875 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	C6orf47	O95873	294 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	LINC00032	P0C843	101 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	CALCR	P30988	508 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	SERPINF1	P36955	418 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	APOBEC1	P41238	236 aa	Known RBP	10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	PPOX	P50336	477 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	HGFAC	Q04756	655 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	TRIP10	Q15642	601 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	HIKESHI	Q53FT3	197 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	KANK2	Q63ZY3	851 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	EMB	Q6PCB8	327 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	LINGO2	Q7L985	606 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	RIMKLA	Q8IXN7	391 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	OR56A1	Q8NGH5	318 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	SFXN5	Q8TD22	340 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	CCDC126	Q96EE4	140 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	FMO2	Q99518	471 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	DOK1	Q99704	481 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	TRMO	Q9BU70	441 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	SAP130	Q9H0E3	1048 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	NELFA	Q9H3P2	528 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	CA10	Q9NS85	328 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	TRAPPC4	Q9Y296	219 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	TMED5	Q9Y3A6	229 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357	HDGFL3	Q9Y3E1	203 aa		10.99	□□□□□ -0.65
LMNA-218	ENST00000502357		A0A0A6YYJ9	748 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357		B9A039	149 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	SLCO1B7	G3V0H7	640 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	KLF11	O14901	512 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	AZIN1	O14977	448 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	IGLV1-44	P01699	117 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	GUSB	P08236	651 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	UBTFL6	P0CB48	400 aa	Predicted RBP	10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	MYL2	P10916	166 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	PGC	P20142	388 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	MPG	P29372	298 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	CLK1	P49759	484 aa	Known RBP	10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	IDH3G	P51553	393 aa	Predicted RBP	10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	P2RY4	P51582	365 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	CCR4	P51679	360 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	PRPS1	P60891	318 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	RPS26	P62854	115 aa	Known RBP	10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	HBA1	P69905	142 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	FUT5	Q11128	374 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	TP53BP2	Q13625	1128 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	ARHGAP11B	Q3KRB8	267 aa		10.98	□□□□□ -0.65
LMNA-218	ENST00000502357	IQCC	Q4KMZ1	466 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms