RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TMEM101Q96IK0 257 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 JSRP1Q96MG2 331 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF577Q9BSK1 485 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 FUZQ9BT04 418 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 MECRQ9BV79 373 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RBM24Q9BX46 236 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 PIGMQ9H3S5 423 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DMAP1Q9NPF5 467 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 NECAP2Q9NVZ3 263 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DCAF16Q9NXF7 216 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 BET1LQ9NYM9 111 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 VPREB3Q9UKI3 123 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 WDR37Q9Y2I8 494 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GMPPBQ9Y5P6 360 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CCDC171Q6TFL3 1326 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TRAV24A0A0B4J272 114 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SH3PXD2BA1X283 911 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 LRIT2A6NDA9 550 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SIGLEC16A6NMB1 481 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PRSS47A8MTI9 375 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 USP17L23D6RBM5 183 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 J3KTA2 159 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 LEFTY2O00292 366 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DTNBO60941 627 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SCGNO76038 276 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 APBB3O95704 486 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PF4P02776 101 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ESR1P03372 595 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 INHBAP08476 426 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 OR10J4P0C629 311 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TPBGLP0DKB5 382 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PORP16435 677 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF3P17036 446 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RAB3BP20337 219 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SSTR2P30874 369 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SOX6P35712 828 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DCTP40126 519 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 VDAC2P45880 294 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 MLLT6P55198 1093 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 CDH13P55290 713 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DCDC1P59894 354 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GABREP78334 506 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ID2Q02363 134 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TLE4Q04727 773 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 AESQ08117 197 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 EGFEM1PQ0D2K5 195 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RALGDSQ12967 914 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 OLIG2Q13516 323 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CDH18Q13634 790 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GK2Q14410 553 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 CHI3L2Q15782 390 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CYP51A1Q16850 503 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DEFB134Q4QY38 66 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PRR16Q569H4 304 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RNASE10Q5GAN6 216 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 CXorf66Q5JRM2 361 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 DCAF10Q5QP82 559 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 MFSD5Q6N075 450 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 USP17L6PQ6QN14 398 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 IL27RAQ6UWB1 636 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SSX9Q7RTT3 188 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CLEC14AQ86T13 490 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF554Q86TJ5 538 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PAQR7Q86WK9 346 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF575Q86XF7 245 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TMEM25Q86YD3 366 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CLVS1Q8IUQ0 354 aaPredicted RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 STK40Q8N2I9 435 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TMEM256Q8N2U0 113 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 EID2Q8N6I1 236 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TSPYL6Q8N831 410 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 ZNF441Q8N8Z8 693 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 NRACQ8N912 160 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 DEFB105AQ8NG35 78 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 IFI44Q8TCB0 444 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SPPL2AQ8TCT8 520 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SCGB1C1Q8TD33 95 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 MRPS31Q92665 395 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 BADQ92934 168 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 GJA10Q969M2 543 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 CCDC47Q96A33 483 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 ISG20Q96AZ6 181 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 FAXDC2Q96IV6 333 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 SNX18Q96RF0 628 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PCGF1Q9BSM1 259 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 MYL10Q9BUA6 226 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RAB17Q9H0T7 212 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 RHBGQ9H310 441 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PLK3Q9H4B4 646 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TPT1P8Q9HAU6 139 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 TUFT1Q9NNX1 390 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 MED11Q9P086 117 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PARP2Q9UGN5 583 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PAIP2BQ9ULR5 123 aaKnown RBP1.29□□□□□ -2.2
XRN1-214ENST00000498077 FREM1Q5H8C1 2179 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 LOC390937A0A1W2PQ73 354 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 hCG_1807616A0A1W2PRN6 198 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 LRP5LA4QPB2 252 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 PGPA6NDG6 321 aa1.29□□□□□ -2.2
XRN1-214ENST00000498077 C4orf51C9J302 202 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms