RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 OR11A1Q9GZK7 315 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 CCM2LQ9NUG4 571 aaPredicted RBP12.25□□□□□ -0.45
CPNE1-227ENST00000498056 ZNF337Q9Y3M9 751 aa12.25□□□□□ -0.45
CPNE1-227ENST00000498056 EIF4E1BA6NMX2 242 aaKnown RBP12.24□□□□□ -0.45
CPNE1-227ENST00000498056 H0Y3Z8 333 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 AQP7O14520 342 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 EIF1AYO14602 144 aaKnown RBP12.24□□□□□ -0.45
CPNE1-227ENST00000498056 GNGT2O14610 69 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 ADAMDEC1O15204 470 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 ZNHIT1O43257 154 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 KRT36O76013 467 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 WISP2O76076 250 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 PRSS23O95084 383 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 GADD45GO95257 159 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 PNMTP11086 282 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 BMP7P18075 431 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 ADH6P28332 368 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 STARP49675 285 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 DLX5P56178 289 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 CRYZQ08257 329 aaKnown RBP12.24□□□□□ -0.45
CPNE1-227ENST00000498056 TRAM2Q15035 370 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 SYT14P1Q58G82 188 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 FAM208BQ5VWN6 2430 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 ZNF324BQ6AW86 544 aaPredicted RBP12.24□□□□□ -0.45
CPNE1-227ENST00000498056 PPP4R4Q6NUP7 873 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 ARHGAP11AQ6P4F7 1023 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 GFRALQ6UXV0 394 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 PIWIL3Q7Z3Z3 882 aaKnown RBP12.24□□□□□ -0.45
CPNE1-227ENST00000498056 ZNF605Q86T29 641 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 MED12LQ86YW9 2145 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 P3H2Q8IVL5 708 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 NKAIN4Q8IVV8 208 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 LILRA2Q8N149 483 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 OR52J3Q8NH60 311 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 TMEM255BQ8WV15 326 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 DDIT4LQ96D03 193 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 ADAM19Q9H013 955 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 REEP1Q9H902 201 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 MAN2C1Q9NTJ4 1040 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 STOML1Q9UBI4 398 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 ACAD8Q9UKU7 415 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 AP4S1Q9Y587 144 aa12.24□□□□□ -0.45
CPNE1-227ENST00000498056 PRRC2CQ9Y520 2896 aaKnown RBP12.24□□□□□ -0.45
CPNE1-227ENST00000498056 A0A087WUJ7 227 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 ZC3H12DA2A288 527 aaKnown RBP12.23□□□□□ -0.45
CPNE1-227ENST00000498056 GJE1A6NN92 205 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 NPIPA2E9PIF3 369 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 NPIPA3F8WFD2 350 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 PIP5K1CO60331 668 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 E2F6O75461 281 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 LYPD3O95274 346 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 ACTL6AO96019 429 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 THRBP10828 461 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 FCGR1AP12314 374 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 ABOP16442 354 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 FUT4P22083 530 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 SHC1P29353 583 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 SRYQ05066 204 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 IQCCQ4KMZ1 466 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 OR2T5Q6IEZ7 315 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 ZFP1Q6P2D0 407 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 TTC33Q6PID6 262 aaPredicted RBP12.23□□□□□ -0.45
CPNE1-227ENST00000498056 ADGRG3Q86Y34 549 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 MEIOBQ8N635 442 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 PAPD5Q8NDF8 572 aaKnown RBP12.23□□□□□ -0.45
CPNE1-227ENST00000498056 PIK3C3Q8NEB9 887 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 OR2T29Q8NH02 315 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 SLC38A4Q969I6 547 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 SARAFQ96BY9 339 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 MPP4Q96JB8 637 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 KLHL15Q96M94 604 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 OR5B2Q96R09 309 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 NMNAT1Q9HAN9 279 aaPredicted RBP12.23□□□□□ -0.45
CPNE1-227ENST00000498056 C12orf10Q9HB07 376 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 VNN3Q9NY84 501 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 CAMK2AQ9UQM7 478 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 SAMHD1Q9Y3Z3 626 aaKnown RBP12.23□□□□□ -0.45
CPNE1-227ENST00000498056 AP4B1Q9Y6B7 739 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 U3KQV3 271 aa12.23□□□□□ -0.45
CPNE1-227ENST00000498056 IGKV1D-42A0A075B6H8 117 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 TRBV4-1A0A0J9YWV2 114 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 A0A1B0GVC2 190 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 A0A1W2PNR3 127 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 A8MVM7 634 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 H0YC42 278 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 LINC01387J3KSC0 135 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 TNFRSF11BO00300 401 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 TNFSF11O14788 317 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 HNRNPRO43390 633 aaKnown RBP12.22□□□□□ -0.45
CPNE1-227ENST00000498056 DEAF1O75398 565 aaPredicted RBP12.22□□□□□ -0.45
CPNE1-227ENST00000498056 AHSA1O95433 338 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 TPOP07202 933 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 EDN3P14138 238 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 LHX2P50458 406 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 UGT2B15P54855 530 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 TPD52P55327 224 aaPredicted RBP12.22□□□□□ -0.45
CPNE1-227ENST00000498056 CLDN20P56880 219 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 SMIM11AP58511 58 aa12.22□□□□□ -0.45
CPNE1-227ENST00000498056 RAC1P63000 192 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms