RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 TDGF1P3P51864 188 aa17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 MFSD13AQ14CX5 517 aa17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 TOMM20Q15388 145 aa17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 WIPI1Q5MNZ9 446 aaPredicted RBP17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 ESPNLQ6ZVH7 1005 aa17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 YRDCQ86U90 279 aaKnown RBP17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 PM20D2Q8IYS1 436 aa17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 LIPHQ8WWY8 451 aa17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 SARAFQ96BY9 339 aa17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 SNRNP40Q96DI7 357 aaKnown RBP17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 CENPNQ96H22 339 aaPredicted RBP17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 C6orf203Q9P0P8 240 aaPredicted RBP17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 SLC7A7Q9UM01 511 aa17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 LYVE1Q9Y5Y7 322 aa17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 EPG5Q9HCE0 2579 aa17.82■□□□□ 0.44
SCAMP3-209ENST00000497470 H0YHG0 523 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 J3KTA2 159 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 EFNA2O43921 213 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 EDN3P14138 238 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 RRM2P31350 389 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 DNAJA1P31689 397 aaKnown RBP17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 RFC3P40938 356 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 PMP22Q01453 160 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 SF3B4Q15427 424 aaKnown RBP eCLIP17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 SYT14P1Q58G82 188 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 PDSS1Q5T2R2 415 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 TTC33Q6PID6 262 aaPredicted RBP17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 SLC7A13Q8TCU3 470 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 PYDC1Q8WXC3 89 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 ABTB1Q969K4 478 aaPredicted RBP17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 PRR14Q9BWN1 585 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 LDAHQ9H6V9 325 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 KRCC1Q9NPI7 259 aaPredicted RBP17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 ZNF337Q9Y3M9 751 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 SPTA1P02549 2419 aa17.81■□□□□ 0.44
SCAMP3-209ENST00000497470 BCKDKO14874 412 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 MT-ATP6P00846 226 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 HOXD4P09016 255 aaPredicted RBP17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 CELA3AP09093 270 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 ZNF708P17019 499 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 FPR1P21462 350 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 IFNGR2P38484 337 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 ARHGDIAP52565 204 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 CTBP2P56545 445 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 CRYZQ08257 329 aaKnown RBP17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 ANKDD1AQ495B1 522 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 DCST1Q5T197 706 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 MBOAT2Q6ZWT7 520 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 SVOPLQ8N434 492 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 CISD2Q8N5K1 135 aaKnown RBP17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 OR4C15Q8NGM1 316 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 TMEM239Q8WW34 195 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 PRDM14Q9GZV8 571 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 TMCC3Q9ULS5 477 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 TMEM5Q9Y2B1 443 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 NTNG1Q9Y2I2 539 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 MED31Q9Y3C7 131 aa17.8■□□□□ 0.44
SCAMP3-209ENST00000497470 A0A087WUU8 490 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 SH3PXD2BA1X283 911 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 NPIPA5E9PKD4 350 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 TNFRSF11BO00300 401 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 GNGT2O14610 69 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 MGRN1O60291 552 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 TIPRLO75663 272 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 PMS2P2O95744 297 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 MT-ND1P03886 318 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 BMP7P18075 431 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 PTGER4P35408 488 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 LHX2P50458 406 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 SPIBQ01892 262 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 EGR4Q05215 589 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 FAM69AQ5T7M9 428 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 RRM2BQ7LG56 351 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 LILRA2Q8N149 483 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 PQLC1Q8N2U9 271 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 MFSD8Q8NHS3 518 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 DNAJC9Q8WXX5 260 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 MIB2Q96AX9 1013 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 KLHL15Q96M94 604 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 ALPK1Q96QP1 1244 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 UCN2Q96RP3 112 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 TIMP4Q99727 224 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 DEFB127Q9H1M4 99 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 SLC6A15Q9H2J7 730 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 NTN4Q9HB63 628 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 STX18Q9P2W9 335 aaKnown RBP17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 NPIPA1Q9UND3 350 aa17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 RPH3AQ9Y2J0 694 aaPredicted RBP17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 RRP15Q9Y3B9 282 aaKnown RBP17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 SAMHD1Q9Y3Z3 626 aaKnown RBP17.79■□□□□ 0.44
SCAMP3-209ENST00000497470 PIEZO2Q9H5I5 2752 aa17.78■□□□□ 0.44
SCAMP3-209ENST00000497470 IGKV1D-42A0A075B6H8 117 aa17.78■□□□□ 0.44
SCAMP3-209ENST00000497470 TRAV36DV7A0A075B6V5 113 aa17.78■□□□□ 0.44
SCAMP3-209ENST00000497470 TMEM72A0PK05 275 aa17.78■□□□□ 0.44
SCAMP3-209ENST00000497470 TTLL8A6PVC2 850 aa17.78■□□□□ 0.44
SCAMP3-209ENST00000497470 GMFGO60234 142 aa17.78■□□□□ 0.44
SCAMP3-209ENST00000497470 YAP1P46937 504 aaKnown RBP17.78■□□□□ 0.44
SCAMP3-209ENST00000497470 CLDN18P56856 261 aa17.78■□□□□ 0.44
SCAMP3-209ENST00000497470 PRKCDQ05655 676 aa17.78■□□□□ 0.44
SCAMP3-209ENST00000497470 ZNF239Q16600 458 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms