RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 ZG16BQ96DA0 208 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 TRIM2Q9C040 744 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 CENPHQ9H3R5 247 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 MEAF6Q9HAF1 191 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 KCNK9Q9NPC2 374 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 EXOSC3Q9NQT5 275 aaKnown RBP15.16■□□□□ 0.02
SMC4-226ENST00000497311 HDGFL3Q9Y3E1 203 aa15.16■□□□□ 0.02
SMC4-226ENST00000497311 MAGED1Q9Y5V3 778 aaPredicted RBP15.16■□□□□ 0.02
SMC4-226ENST00000497311 IGKV3D-15A0A087WSY6 115 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 INAFM1C9JVW0 142 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 PMS2P2O95744 297 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 CDKN1AP38936 164 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 CLK1P49759 484 aaKnown RBP15.15■□□□□ 0.02
SMC4-226ENST00000497311 CHRNEQ04844 493 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 VEZF1Q14119 521 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 BEND6Q5SZJ8 279 aaPredicted RBP15.15■□□□□ 0.02
SMC4-226ENST00000497311 HMGN2P46Q86SG4 172 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 UBE2J2Q8N2K1 259 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 TRIML2Q8N7C3 387 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 ZNF433Q8N7K0 673 aaPredicted RBP15.15■□□□□ 0.02
SMC4-226ENST00000497311 ARL5BQ96KC2 179 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 CCDC115Q96NT0 180 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 PNPOQ9NVS9 261 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 CISD1Q9NZ45 108 aaKnown RBP15.15■□□□□ 0.02
SMC4-226ENST00000497311 BTNL2Q9UIR0 455 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 LIPT1Q9Y234 373 aa15.15■□□□□ 0.02
SMC4-226ENST00000497311 NOSIPQ9Y314 301 aaKnown RBP15.15■□□□□ 0.02
SMC4-226ENST00000497311 PRAMEF27A3QJZ7 478 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 OR5H1A6NKK0 313 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 CLDN24A6NM45 220 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 HMGN4O00479 90 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 GPR171O14626 319 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 DNPH1O43598 174 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 RAMP1O60894 148 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 PGM3O95394 542 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 HTR3AP46098 478 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 IDH2P48735 452 aaKnown RBP15.14■□□□□ 0.01
SMC4-226ENST00000497311 NME5P56597 212 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 FAPQ12884 760 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 PGGHGQ32M88 737 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 FBXW9Q5XUX1 488 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 OGFOD2Q6N063 350 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 PRIMA1Q86XR5 153 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 RNF130Q86XS8 419 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 ADGRG3Q86Y34 549 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 PIGXQ8TBF5 258 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 APH1AQ96BI3 265 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 DNAJA3Q96EY1 480 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 TEX37Q96LM6 180 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 PAIP2Q9BPZ3 127 aaKnown RBP15.14■□□□□ 0.01
SMC4-226ENST00000497311 ALG2Q9H553 416 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 FAIMQ9NVQ4 179 aa15.14■□□□□ 0.01
SMC4-226ENST00000497311 CIB4A0PJX0 185 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 CCDC154A6NI56 674 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 ZNF716A6NP11 495 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 IGHV3-9P01782 118 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 CCNA2P20248 432 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 ANXA11P50995 505 aaKnown RBP15.13■□□□□ 0.01
SMC4-226ENST00000497311 OR2B6P58173 313 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 UFM1P61960 85 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 TXNL4AP83876 142 aaKnown RBP15.13■□□□□ 0.01
SMC4-226ENST00000497311 BST1Q10588 318 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 MPP2Q14168 576 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 CMIPQ8IY22 773 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 CNOT9Q92600 299 aaKnown RBP15.13■□□□□ 0.01
SMC4-226ENST00000497311 TRNT1Q96Q11 434 aaKnown RBP15.13■□□□□ 0.01
SMC4-226ENST00000497311 PANX1Q96RD7 426 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 OR11A1Q9GZK7 315 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 ASB6Q9NWX5 421 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 NPAP1Q9NZP6 1156 aa15.13■□□□□ 0.01
SMC4-226ENST00000497311 DNHD1Q96M86 4753 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 CCT8L1PA6NM43 557 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 SHISA9B4DS77 424 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 RNF223E7ERA6 249 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 ABCD4O14678 606 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 ADAM11O75078 769 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 MRPL33O75394 65 aaKnown RBP15.12■□□□□ 0.01
SMC4-226ENST00000497311 RAD51DO75771 328 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 C1QCP02747 245 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 ALDOCP09972 364 aaKnown RBP15.12■□□□□ 0.01
SMC4-226ENST00000497311 MAGEA8P43361 318 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 SLC16A1P53985 500 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 CDH11P55287 796 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 PLAURQ03405 335 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 LRRC74AQ0VAA2 488 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 GNA13Q14344 377 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 SYPL1Q16563 259 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 LRRC74BQ6ZQY2 392 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 ZNF621Q6ZSS3 439 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 SPATA19Q7Z5L4 167 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 CCDC103Q8IW40 242 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 ANKFN1Q8N957 763 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 ZBTB9Q96C00 473 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 DDIT4LQ96D03 193 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 RADILQ96JH8 1075 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 TRAF4Q9BUZ4 470 aaPredicted RBP15.12■□□□□ 0.01
SMC4-226ENST00000497311 GRIP2Q9C0E4 1043 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 SLC38A1Q9H2H9 487 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 SLCO5A1Q9H2Y9 848 aa15.12■□□□□ 0.01
SMC4-226ENST00000497311 MTHFD2LQ9H903 347 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 248.7 ms