RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 TRIM36Q9NQ86 728 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 INIPQ9NRY2 104 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 PTTG2Q9NZH5 202 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 CRNNQ9UBG3 495 aaPredicted RBP7.67□□□□□ -1.18
USP54-215ENST00000497106 TMEM184BQ9Y519 407 aaPredicted RBP7.67□□□□□ -1.18
USP54-215ENST00000497106 N6AMT1Q9Y5N5 214 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 A0A087WUJ7 227 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 SYNGR4O95473 234 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 FTH1P19P0C7X4 201 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 ADORA3P0DMS8 318 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 S1PR1P21453 382 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 CTBP2P56545 445 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 SELENBP1Q13228 472 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 TBCEQ15813 527 aaPredicted RBP7.67□□□□□ -1.18
USP54-215ENST00000497106 COL28A1Q2UY09 1125 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 COX15Q7KZN9 410 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 PRICKLE2Q7Z3G6 844 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 B3GNT8Q7Z7M8 397 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 POMGNT2Q8NAT1 580 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 C8orf44Q96CB5 159 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 TMEFF2Q9UIK5 374 aaPredicted RBP7.67□□□□□ -1.18
USP54-215ENST00000497106 MOKQ9UQ07 419 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 EIF1BO60739 113 aaKnown RBP7.67□□□□□ -1.18
USP54-215ENST00000497106 GCM2O75603 506 aaPredicted RBP7.67□□□□□ -1.18
USP54-215ENST00000497106 CRABP1P29762 137 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 MTNR1AP48039 350 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 GBX2P52951 348 aaPredicted RBP7.67□□□□□ -1.18
USP54-215ENST00000497106 CTXN1P60606 82 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 ISL1P61371 349 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 SLC35A1P78382 337 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 SLC35D3Q5M8T2 416 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 NXNL2Q5VZ03 156 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 NKAIN4Q8IVV8 208 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 C9orf40Q8IXQ3 194 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 POGLUT1Q8NBL1 392 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 OR4N2Q8NGD1 307 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 OR6S1Q8NH40 331 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 NRSN2Q9GZP1 204 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 POLHQ9Y253 713 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 KLF13Q9Y2Y9 288 aaPredicted RBP7.67□□□□□ -1.18
USP54-215ENST00000497106 LY6G6EA0A0G2JKS1 128 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 ITGA10O75578 1167 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 CDK1P06493 297 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 NAT2P11245 290 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 INSM1Q01101 510 aaPredicted RBP7.67□□□□□ -1.18
USP54-215ENST00000497106 C3orf33Q6P1S2 294 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 ZER1Q7Z7L7 766 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 UEVLDQ8IX04 471 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 FAM26EQ8N5C1 309 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 THAP4Q8WY91 577 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 AP3S1Q92572 193 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 THOC3Q96J01 351 aaKnown RBP7.67□□□□□ -1.18
USP54-215ENST00000497106 CNN2Q99439 309 aaKnown RBP7.67□□□□□ -1.18
USP54-215ENST00000497106 SPSB2Q99619 263 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 P4HTMQ9NXG6 502 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 WIF1Q9Y5W5 379 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 U3KQA8 63 aa7.67□□□□□ -1.18
USP54-215ENST00000497106 GON4LQ3T8J9 2241 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 ZNF891A8MT65 544 aaPredicted RBP7.66□□□□□ -1.18
USP54-215ENST00000497106 KLRC4-KLRK1H3BQV0 150 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 TRAPPC6AO75865 159 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 OR2J2O76002 312 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 MT-ND5P03915 603 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 CTSBP07858 339 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 RNF144AP50876 292 aaPredicted RBP7.66□□□□□ -1.18
USP54-215ENST00000497106 TAF13Q15543 124 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 MRPL14Q6P1L8 145 aaKnown RBP7.66□□□□□ -1.18
USP54-215ENST00000497106 DBX2Q6ZNG2 339 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 PLEKHG7Q6ZR37 379 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 LACC1Q8IV20 430 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 ENTHD1Q8IYW4 607 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 ARHGEF39Q8N4T4 335 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 MEIOBQ8N635 442 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 OR10H4Q8NGA5 316 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 OR14L1PQ8NHC6 308 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 KCNE4Q8WWG9 221 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 HOXB13Q92826 284 aaPredicted RBP7.66□□□□□ -1.18
USP54-215ENST00000497106 NMD3Q96D46 503 aaKnown RBP7.66□□□□□ -1.18
USP54-215ENST00000497106 ARSGQ96EG1 525 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 CDADC1Q9BWV3 514 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 SEMA4CQ9C0C4 833 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 RERGLQ9H628 205 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 FBXL4Q9UKA2 621 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 IGHV1-45A0A0A0MS14 117 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 KRT33AO76009 404 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 MED26O95402 600 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 PPP1R3DO95685 299 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 MT-ND2P03891 347 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 GNAO1P09471 354 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 HSF2Q03933 536 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 MZT2AQ6P582 158 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 FAM198BQ6UWH4 519 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 ISLR2Q6UXK2 745 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 DGAT2L6Q6ZPD8 337 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 USP43Q70EL4 1123 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 SATL1Q86VE3 508 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 OR5J2Q8NH18 312 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 ADIPOR1Q96A54 375 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 DACH2Q96NX9 599 aa7.66□□□□□ -1.18
USP54-215ENST00000497106 DSN1Q9H410 356 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms