RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ZNF181Q2M3W8 571 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ABHD17BQ5VST6 288 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF529Q6P280 563 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 NAPRTQ6XQN6 538 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SSX7Q7RTT5 188 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 APTXQ7Z2E3 356 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 C1orf87Q8N0U7 546 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GPC2Q8N158 579 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GDPD1Q8N9F7 314 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 OR10K1Q8NGX5 313 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PIGXQ8TBF5 258 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 C11orf40Q8WZ69 217 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 DNASE1L2Q92874 299 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 DAZLQ92904 295 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CMTM7Q96FZ5 175 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SMIM10Q96HG1 83 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 POM121L2Q96KW2 1035 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SENP8Q96LD8 212 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 AMDHD1Q96NU7 426 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 TMEM43Q9BTV4 400 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ALG8Q9BVK2 526 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 HDHD5Q9BXW7 423 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 STRADBQ9C0K7 418 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 NXF2Q9GZY0 626 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 S1PR5Q9H228 398 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 DCSTAMPQ9H295 470 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 UBQLN3Q9H347 655 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 SEC61A2Q9H9S3 476 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 POPDC2Q9HBU9 364 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 EML4Q9HC35 981 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 POLD4Q9HCU8 107 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 LYRM4Q9HD34 91 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 AKIP1Q9NQ31 210 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 PXMP2Q9NR77 195 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 GPR173Q9NS66 373 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CUTCQ9NTM9 273 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 LRWD1Q9UFC0 647 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CNOT8Q9UFF9 292 aaKnown RBP2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 CDH22Q9UJ99 828 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ING4Q9UNL4 249 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 TNNQ9UQP3 1299 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF337Q9Y3M9 751 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 C9orf84Q5VXU9 1444 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 A2MP01023 1474 aa2.86□□□□□ -1.95
SNRNP48-202ENST00000496946 KIF21BO75037 1637 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 MADDQ8WXG6 1647 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 A0A087WXM4 84 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CIB4A0PJX0 185 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 NPIPB13A6NJU9 1138 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 NPIPB4C9JG80 1138 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PROB1E7EW31 1015 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 RNASEK-C17orf49H0YIS7 233 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 H3BMQ9 156 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 M0QYT0 321 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 M0R143 59 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PPP6CO00743 305 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 DLGAP1O14490 977 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SIVA1O15304 175 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 EMC8O43402 210 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 MOSPD3O75425 235 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CLDN9O95484 217 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC16A8O95907 504 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 NDUFB10O96000 172 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 IFNA17P01571 189 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 C8GP07360 202 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PET100P0DJ07 73 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CYP2D6P10635 497 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 FGF5P12034 268 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PGAM1P18669 254 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 S1PR1P21453 382 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 BCKDHBP21953 392 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PCMT1P22061 227 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 CA4P22748 312 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 AZGP1P25311 298 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SDC4P31431 198 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 FMO4P31512 558 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SLC6A6P31641 620 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 COILP38432 576 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 IFNGR2P38484 337 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PMELP40967 661 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 AQP2P41181 271 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 IDH2P48735 452 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 GZMKP49863 264 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 NOVA1P51513 510 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 EFNA3P52797 238 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ARPP19P56211 112 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 MAXP61244 160 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ADARB1P78563 741 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ELAVL2Q12926 359 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 BAATQ14032 418 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 FASTKQ14296 549 aaKnown RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 EXOC3L2Q2M3D2 409 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 ZNF699Q32M78 642 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 PTPN20Q4JDL3 420 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 AGKQ53H12 422 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 SOWAHCQ53LP3 525 aaPredicted RBP2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 XKR7Q5GH72 579 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 FNBP1LQ5T0N5 605 aa2.85□□□□□ -1.95
SNRNP48-202ENST00000496946 C6orf52Q5T4I8 152 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms