RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 KRTAP21-3Q3LHN1 58 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 NXNQ6DKJ4 435 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 ALKBH2Q6NS38 261 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 LRRC74BQ6ZQY2 392 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 ZNF621Q6ZSS3 439 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 YTHDF3Q7Z739 585 aaKnown RBP12.64□□□□□ -0.39
VTI1A-209ENST00000496445 BIVMQ86UB2 503 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 ADGRG3Q86Y34 549 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 CIARTQ8N365 385 aaPredicted RBP12.64□□□□□ -0.39
VTI1A-209ENST00000496445 ARFGAP2Q8N6H7 521 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 LILRB1Q8NHL6 650 aaPredicted RBP12.64□□□□□ -0.39
VTI1A-209ENST00000496445 WDR60Q8WVS4 1066 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 KISS1RQ969F8 398 aaPredicted RBP12.64□□□□□ -0.39
VTI1A-209ENST00000496445 Q96MF0 132 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 OR52B2Q96RD2 323 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 ZBTB18Q99592 522 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 HDHD5Q9BXW7 423 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 POTEKPQ9BYX7 375 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 GSX2Q9BZM3 304 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 MANSC1Q9H8J5 431 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 LIPT1Q9Y234 373 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 SPIN1Q9Y657 262 aaPredicted RBP12.64□□□□□ -0.39
VTI1A-209ENST00000496445 CADP27708 2225 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 USF3Q68DE3 2245 aa12.64□□□□□ -0.39
VTI1A-209ENST00000496445 DSPPQ9NZW4 1301 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 TMEM72A0PK05 275 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 SLCO1B7G3V0H7 640 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 ARHGEF9O43307 516 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 RAMP1O60894 148 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 SLC22A3O75751 556 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 LYZL6O75951 148 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 PMS2P2O95744 297 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 PAX1P15863 534 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 IDH2P48735 452 aaKnown RBP12.63□□□□□ -0.39
VTI1A-209ENST00000496445 LRRC74AQ0VAA2 488 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 GTDC1Q4AE62 458 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 NCMAPQ5T1S8 102 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 MRPL2Q5T653 305 aaKnown RBP12.63□□□□□ -0.39
VTI1A-209ENST00000496445 PRSS57Q6UWY2 283 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 Q71RC1 249 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-209ENST00000496445 BHLHA15Q7RTS1 189 aaPredicted RBP12.63□□□□□ -0.39
VTI1A-209ENST00000496445 GALNT5Q7Z7M9 940 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 MTDHQ86UE4 582 aaKnown RBP12.63□□□□□ -0.39
VTI1A-209ENST00000496445 CMIPQ8IY22 773 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 ZNF611Q8N823 705 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 OR9I1Q8NGQ6 314 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 AKAP1Q92667 903 aaKnown RBP eCLIP12.63□□□□□ -0.39
VTI1A-209ENST00000496445 COX4I2Q96KJ9 171 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 NKIRAS1Q9NYS0 192 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 ZIM2Q9NZV7 527 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 HDGFL3Q9Y3E1 203 aa12.63□□□□□ -0.39
VTI1A-209ENST00000496445 FN1P02751 2386 aaKnown RBP12.63□□□□□ -0.39
VTI1A-209ENST00000496445 TRIM64A6NGJ6 449 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 TRIM64BA6NI03 449 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 FAAHO00519 579 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 RFXANKO14593 260 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 KLF11O14901 512 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 IL6P05231 212 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 TFPIP10646 304 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 ETFAP13804 333 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 CCNA2P20248 432 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 NTF4P34130 210 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 EPS8Q12929 822 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 PDK3Q15120 406 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 LCE2DQ5TA82 110 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-209ENST00000496445 ADAM5Q6NVV9 412 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 PIWIL2Q8TC59 973 aaKnown RBP12.62□□□□□ -0.39
VTI1A-209ENST00000496445 HSD17B8Q92506 261 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 NEUROG1Q92886 237 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 VPS33AQ96AX1 596 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 SDR39U1Q9NRG7 319 aaPredicted RBP12.62□□□□□ -0.39
VTI1A-209ENST00000496445 EMC3Q9P0I2 261 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 OSGIN1Q9UJX0 560 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 RNF115Q9Y4L5 304 aa12.62□□□□□ -0.39
VTI1A-209ENST00000496445 TMED7-TICAM2A0A0A6YYA0 188 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 ZC3H12DA2A288 527 aaKnown RBP12.61□□□□□ -0.39
VTI1A-209ENST00000496445 H7C1Q1 480 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 CLOCKO15516 846 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 DNPH1O43598 174 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 ERLIN1O75477 346 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 KRT75O95678 551 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 IGHV3-9P01782 118 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 DBIP07108 87 aaKnown RBP12.61□□□□□ -0.39
VTI1A-209ENST00000496445 NR2F1P10589 423 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 IMPDH2P12268 514 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 IL7RP16871 459 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 TACR3P29371 465 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 ADSLP30566 484 aaPredicted RBP12.61□□□□□ -0.39
VTI1A-209ENST00000496445 SLC1A3P43003 542 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 CLK1P49759 484 aaKnown RBP12.61□□□□□ -0.39
VTI1A-209ENST00000496445 ANXA11P50995 505 aaKnown RBP12.61□□□□□ -0.39
VTI1A-209ENST00000496445 POLR2HP52434 150 aaKnown RBP12.61□□□□□ -0.39
VTI1A-209ENST00000496445 SLC16A1P53985 500 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 BSPH1Q075Z2 132 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 STK11Q15831 433 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 GSTA3Q16772 222 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 ZNF836Q6ZNA1 936 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 MSANTD1Q6ZTZ1 278 aa12.61□□□□□ -0.39
VTI1A-209ENST00000496445 VRK2Q86Y07 508 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms