RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 NRF1Q16656 503 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 AGAP6Q5VW22 663 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 AP1ARQ63HQ0 302 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 FRRS1Q6ZNA5 592 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 GRINAQ7Z429 371 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 ZNF781Q8N8C0 355 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 PIGXQ8TBF5 258 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 RAB8BQ92930 207 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 APH1AQ96BI3 265 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 ROPN1LQ96C74 230 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 ARL5BQ96KC2 179 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 PKNOX2Q96KN3 472 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 B3GALT5Q9Y2C3 310 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 HDGFL3Q9Y3E1 203 aa19.46■□□□□ 0.71
HDDC3-203ENST00000494993 CUBNO60494 3623 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 PRSS51A0A1B0GVH4 220 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 CIB4A0PJX0 185 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 GPR171O14626 319 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 DNPH1O43598 174 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 CPSF4O95639 269 aaKnown RBP19.45■□□□□ 0.7
HDDC3-203ENST00000494993 PTNP21246 168 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 RYKP34925 604 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 VSNL1P62760 191 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 PHC1P78364 1004 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 ANXA8L1Q5VT79 327 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 SAXO2Q658L1 398 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 EMBQ6PCB8 327 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 TMEM108Q6UXF1 575 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
HDDC3-203ENST00000494993 OR52N5Q8NH56 324 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 DNAJA3Q96EY1 480 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 MGAT4BQ9UQ53 548 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 SLC25A15Q9Y619 301 aa19.45■□□□□ 0.7
HDDC3-203ENST00000494993 CCT8L1PA6NM43 557 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 SSX4O60224 188 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 FKBP2P26885 142 aaKnown RBP19.44■□□□□ 0.7
HDDC3-203ENST00000494993 NTF4P34130 210 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 CLK1P49759 484 aaKnown RBP19.44■□□□□ 0.7
HDDC3-203ENST00000494993 KHKP50053 298 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 SLC16A1P53985 500 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 PLAURQ03405 335 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 C11orf71Q6IPW1 123 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 ADGRG3Q86Y34 549 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 VPS37AQ8NEZ2 397 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 TESCQ96BS2 214 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 ZG16BQ96DA0 208 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 NEURL3Q96EH8 262 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 ADAD1Q96M93 576 aaKnown RBP19.44■□□□□ 0.7
HDDC3-203ENST00000494993 RHNO1Q9BSD3 238 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 OR11A1Q9GZK7 315 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 EXOSC3Q9NQT5 275 aaKnown RBP19.44■□□□□ 0.7
HDDC3-203ENST00000494993 YAE1D1Q9NRH1 226 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.44■□□□□ 0.7
HDDC3-203ENST00000494993 ASB6Q9NWX5 421 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 TAS2R16Q9NYV7 291 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 MALT1Q9UDY8 824 aa19.44■□□□□ 0.7
HDDC3-203ENST00000494993 E7EQL1 145 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 SERPINE1P05121 402 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 MYZAPP0CAP1 466 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 PTAFRP25105 342 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 TTKP33981 857 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 ZNF83P51522 516 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 ABCE1P61221 599 aaKnown RBP19.43■□□□□ 0.7
HDDC3-203ENST00000494993 IRX1P78414 480 aaPredicted RBP19.43■□□□□ 0.7
HDDC3-203ENST00000494993 KCNJ10P78508 379 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 SPOCK1Q08629 439 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 CASP8Q14790 479 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 CHI3L2Q15782 390 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 SLC22A25Q6T423 547 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 KLHL17Q6TDP4 642 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 HMGN2P46Q86SG4 172 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 CCDC103Q8IW40 242 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 ARFGAP2Q8N6H7 521 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 CACNG6Q9BXT2 260 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 CBLN4Q9NTU7 201 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 MARCOQ9UEW3 520 aaPredicted RBP19.43■□□□□ 0.7
HDDC3-203ENST00000494993 POU2F3Q9UKI9 436 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 RAP2CQ9Y3L5 183 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 ARFGEF3Q5TH69 2177 aa19.43■□□□□ 0.7
HDDC3-203ENST00000494993 A0A1W2PR80 420 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 PRAMEF27A3QJZ7 478 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 WDR91A4D1P6 747 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 CLDN24A6NM45 220 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 MRPL33O75394 65 aaKnown RBP19.42■□□□□ 0.7
HDDC3-203ENST00000494993 DHRS4L1P0CG22 281 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 CD40P25942 277 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 CHI3L1P36222 383 aaPredicted RBP19.42■□□□□ 0.7
HDDC3-203ENST00000494993 MAGEA8P43361 318 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 NUDT6P53370 316 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 OR2B6P58173 313 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 HPCAP84074 193 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 CHRNEQ04844 493 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 DPY19L1Q2PZI1 675 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 GPAT3Q53EU6 434 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 SPANXN4Q5MJ08 99 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 HIPK1Q86Z02 1210 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 AENQ8WTP8 325 aaKnown RBP19.42■□□□□ 0.7
HDDC3-203ENST00000494993 DHRS9Q9BPW9 319 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 SLC35A5Q9BS91 424 aa19.42■□□□□ 0.7
HDDC3-203ENST00000494993 TMEM181Q9P2C4 612 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms