RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SLC38A1Q9H2H9 487 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 MTHFD2LQ9H903 347 aaPredicted RBP8.51□□□□□ -1.05
MSH5-218ENST00000494646 BCO1Q9HAY6 547 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 POLE3Q9NRF9 147 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 SLC6A13Q9NSD5 602 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 NKIRAS1Q9NYS0 192 aa8.51□□□□□ -1.05
MSH5-218ENST00000494646 TMEM72A0PK05 275 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 RFXANKO14593 260 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 CLOCKO15516 846 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 ANP32DO95626 131 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 KRT75O95678 551 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 GUSBP08236 651 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 NUDT7P0C024 238 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 ETFAP13804 333 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 HOXB4P17483 251 aaPredicted RBP8.5□□□□□ -1.05
MSH5-218ENST00000494646 CRATP43155 626 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 OR3A2P47893 321 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 CSNK2A1P68400 391 aaPredicted RBP8.5□□□□□ -1.05
MSH5-218ENST00000494646 PLAURQ03405 335 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 STK11Q15831 433 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 AP1ARQ63HQ0 302 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 C20orf204Q6ZNR8 217 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 GRINAQ7Z429 371 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 MAVSQ7Z434 540 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 GALNT5Q7Z7M9 940 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 MTDHQ86UE4 582 aaKnown RBP8.5□□□□□ -1.05
MSH5-218ENST00000494646 VRK2Q86Y07 508 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 LRRC75A-AS1Q8N1F1 130 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 DEPDC4Q8N2C3 294 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 UBE2J2Q8N2K1 259 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 GLB1L3Q8NCI6 653 aaPredicted RBP8.5□□□□□ -1.05
MSH5-218ENST00000494646 FAM71CQ8NEG0 241 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 OR9I1Q8NGQ6 314 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 LILRB1Q8NHL6 650 aaPredicted RBP8.5□□□□□ -1.05
MSH5-218ENST00000494646 TMEM171Q8WVE6 324 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 HSD17B8Q92506 261 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 KISS1RQ969F8 398 aaPredicted RBP8.5□□□□□ -1.05
MSH5-218ENST00000494646 TLCD1Q96CP7 247 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 TRNT1Q96Q11 434 aaKnown RBP8.5□□□□□ -1.05
MSH5-218ENST00000494646 OR10A4Q9H209 315 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 GP6Q9HCN6 339 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 RLIMQ9NVW2 624 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 LAMP3Q9UQV4 416 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 LIPT1Q9Y234 373 aa8.5□□□□□ -1.05
MSH5-218ENST00000494646 SPIN1Q9Y657 262 aaPredicted RBP8.5□□□□□ -1.05
MSH5-218ENST00000494646 TMED7-TICAM2A0A0A6YYA0 188 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 DPRXA6NFQ7 191 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 TRIM64A6NGJ6 449 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 TRIM64BA6NI03 449 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 AGAP5A6NIR3 686 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 SLCO1B7G3V0H7 640 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 H7C1Q1 480 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 UBDO15205 165 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 RAMP1O60894 148 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 ERLIN1O75477 346 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 LY6G6DO95868 133 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 IL6P05231 212 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 CD3EP07766 207 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 GKN3PP0CG01 181 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 IMPDH2P12268 514 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 IDO1P14902 403 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 IGHV1-2P23083 117 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 TACR3P29371 465 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 NTF4P34130 210 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 PTH2RP49190 550 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 SLC18A1P54219 525 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 NR1H2P55055 460 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 LTBQ06643 244 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 P2RY6Q15077 328 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 MAPK11Q15759 364 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 GTDC1Q4AE62 458 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 PDCD4Q53EL6 469 aaKnown RBP8.49□□□□□ -1.05
MSH5-218ENST00000494646 NCMAPQ5T1S8 102 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 CLEC9AQ6UXN8 241 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 Q6ZT83 130 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 BIVMQ86UB2 503 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 PIWIL2Q8TC59 973 aaKnown RBP8.49□□□□□ -1.05
MSH5-218ENST00000494646 WDR60Q8WVS4 1066 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 VPS33AQ96AX1 596 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 MAELQ96JY0 434 aaKnown RBP8.49□□□□□ -1.05
MSH5-218ENST00000494646 TMEM204Q9BSN7 226 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 ESRP2Q9H6T0 727 aaKnown RBP8.49□□□□□ -1.05
MSH5-218ENST00000494646 EXOSC3Q9NQT5 275 aaKnown RBP8.49□□□□□ -1.05
MSH5-218ENST00000494646 TMEM181Q9P2C4 612 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 CHRNA9Q9UGM1 479 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 OSGIN1Q9UJX0 560 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 NOSIPQ9Y314 301 aaKnown RBP8.49□□□□□ -1.05
MSH5-218ENST00000494646 TMED7Q9Y3B3 224 aa8.49□□□□□ -1.05
MSH5-218ENST00000494646 A0A1W2PR80 420 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 CIB4A0PJX0 185 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 ZC3H12DA2A288 527 aaKnown RBP8.48□□□□□ -1.05
MSH5-218ENST00000494646 CFAP73A6NFT4 308 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 ZNF716A6NP11 495 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 ZNF724A8MTY0 619 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 HS3ST1O14792 307 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 PMS2P2O95744 297 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 DBIP07108 87 aaKnown RBP8.48□□□□□ -1.05
MSH5-218ENST00000494646 PTNP21246 168 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 SLC1A3P43003 542 aa8.48□□□□□ -1.05
MSH5-218ENST00000494646 HTR3AP46098 478 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms