RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 OR9I1Q8NGQ6 314 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 LILRB1Q8NHL6 650 aaPredicted RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 PIWIL2Q8TC59 973 aaKnown RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 SLC25A43Q8WUT9 341 aaPredicted RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 TACO1Q9BSH4 297 aaKnown RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 MTHFD2LQ9H903 347 aaPredicted RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 SDR39U1Q9NRG7 319 aaPredicted RBP8.64□□□□□ -1.03
UFD1-210ENST00000494054 CHRNA9Q9UGM1 479 aa8.64□□□□□ -1.03
UFD1-210ENST00000494054 IGKV3D-15A0A087WSY6 115 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 TMED7-TICAM2A0A0A6YYA0 188 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 TMEM72A0PK05 275 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 ZNF716A6NP11 495 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 KLF11O14901 512 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 UBDO15205 165 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 ERLIN1O75477 346 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 LYZL6O75951 148 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 KRT75O95678 551 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 IGHV3-9P01782 118 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 IL6P05231 212 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 INHBBP09529 407 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 NR2F1P10589 423 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 IMPDH2P12268 514 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 ETFAP13804 333 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 IGHV1-2P23083 117 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 TACR3P29371 465 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 PTH2RP49190 550 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 CSNK2A1P68400 391 aaPredicted RBP8.63□□□□□ -1.03
UFD1-210ENST00000494054 TXNL4AP83876 142 aaKnown RBP8.63□□□□□ -1.03
UFD1-210ENST00000494054 LRRC74AQ0VAA2 488 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 GSTA3Q16772 222 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 NCMAPQ5T1S8 102 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 MRPL2Q5T653 305 aaKnown RBP8.63□□□□□ -1.03
UFD1-210ENST00000494054 EPGNQ6UW88 154 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 YTHDF3Q7Z739 585 aaKnown RBP8.63□□□□□ -1.03
UFD1-210ENST00000494054 GALNT5Q7Z7M9 940 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 VRK2Q86Y07 508 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 CCDC103Q8IW40 242 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 CMIPQ8IY22 773 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 ZNF611Q8N823 705 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 WDR60Q8WVS4 1066 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 HSD17B8Q92506 261 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 AKAP1Q92667 903 aaKnown RBP eCLIP8.63□□□□□ -1.03
UFD1-210ENST00000494054 NEUROG1Q92886 237 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 KISS1RQ969F8 398 aaPredicted RBP8.63□□□□□ -1.03
UFD1-210ENST00000494054 VPS33AQ96AX1 596 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 AURKBQ96GD4 344 aaPredicted RBP8.63□□□□□ -1.03
UFD1-210ENST00000494054 Q96MF0 132 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 RLIMQ9NVW2 624 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 ZIM2Q9NZV7 527 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 OSGIN1Q9UJX0 560 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 TMED7Q9Y3B3 224 aa8.63□□□□□ -1.03
UFD1-210ENST00000494054 SPIN1Q9Y657 262 aaPredicted RBP8.63□□□□□ -1.03
UFD1-210ENST00000494054 USF3Q68DE3 2245 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 ZC3H12DA2A288 527 aaKnown RBP8.62□□□□□ -1.03
UFD1-210ENST00000494054 DPRXA6NFQ7 191 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 CFAP73A6NFT4 308 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 TRIM64A6NGJ6 449 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 TRIM64BA6NI03 449 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 H7C1Q1 480 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 HS3ST1O14792 307 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 CLOCKO15516 846 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 PMS2P2O95744 297 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 DBIP07108 87 aaKnown RBP8.62□□□□□ -1.03
UFD1-210ENST00000494054 NUDT7P0C024 238 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 TFPTP0C1Z6 253 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 GKN3PP0CG01 181 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 ZCCHC18P0CG32 403 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 IL7RP16871 459 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 COX5AP20674 150 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 SLC1A3P43003 542 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 CRATP43155 626 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 HTR3AP46098 478 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 CLK1P49759 484 aaKnown RBP8.62□□□□□ -1.03
UFD1-210ENST00000494054 ANXA11P50995 505 aaKnown RBP8.62□□□□□ -1.03
UFD1-210ENST00000494054 POLR2JP52435 117 aaKnown RBP8.62□□□□□ -1.03
UFD1-210ENST00000494054 OR2B6P58173 313 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 H3F3AP84243 136 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 EPS8Q12929 822 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 CAPRIN1Q14444 709 aaKnown RBP8.62□□□□□ -1.03
UFD1-210ENST00000494054 PDK3Q15120 406 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 RPS26P11Q5JNZ5 115 aaPredicted RBP8.62□□□□□ -1.03
UFD1-210ENST00000494054 AGBL2Q5U5Z8 902 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 ADAM5Q6NVV9 412 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 PRSS57Q6UWY2 283 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 ZNF836Q6ZNA1 936 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 BIVMQ86UB2 503 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 ZNF100Q8IYN0 542 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 SLC38A5Q8WUX1 472 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 ITCHQ96J02 903 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 POTEKPQ9BYX7 375 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 GSX2Q9BZM3 304 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 ADAM19Q9H013 955 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 TPT1P8Q9HAU6 139 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 ZNF701Q9NV72 531 aaPredicted RBP8.62□□□□□ -1.03
UFD1-210ENST00000494054 TMEM181Q9P2C4 612 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 TRAPPC4Q9Y296 219 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 HDGFL3Q9Y3E1 203 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 CHST2Q9Y4C5 530 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 RNF115Q9Y4L5 304 aa8.62□□□□□ -1.03
UFD1-210ENST00000494054 USH1CQ9Y6N9 552 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms