RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 RGNQ15493 299 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 LTB4RQ15722 352 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 MSS51Q4VC12 460 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 LY6G5CQ5SRR4 150 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SSX7Q7RTT5 188 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 PLD6Q8N2A8 252 aaKnown RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CYB561A3Q8NBI2 242 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 BPIFCQ8NFQ6 507 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SCLYQ96I15 445 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 C4orf36Q96KX1 117 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 RIMS3Q9UJD0 308 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 INTS6Q9UL03 887 aaKnown RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 A0A1W2PP55 124 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 LRIT2A6NDA9 550 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF701M0R085 212 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 FOXE1O00358 373 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 AP1G1O43747 822 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CACNG3O60359 315 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CPN1P15169 458 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 GDF1P27539 372 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 DSC1Q08554 894 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 IKZF1Q13422 519 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 OLIG2Q13516 323 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 C1orf61Q13536 156 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF765Q7L2R6 523 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 MRPL10Q7Z7H8 261 aaKnown RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SIMC1Q8NDZ2 872 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 TMEM104Q8NE00 496 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 OR5B3Q8NH48 314 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 DUSP19Q8WTR2 217 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 MUCL1Q96DR8 90 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 IL17FQ96PD4 163 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 FAM103A1Q9BTL3 118 aaKnown RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CRB3Q9BUF7 120 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 GPR174Q9BXC1 333 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SIX2Q9NPC8 291 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 POMT1Q9Y6A1 747 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 V9GYS6 101 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 IGHG1P01857 330 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 GSTP1P09211 210 aaKnown RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 RAB13P51153 203 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 BIDP55957 195 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SUMO1P63165 101 aaKnown RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CDK5R2Q13319 367 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SLC35F3Q8IY50 421 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CLECL1Q8IZS7 167 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 FRMD1Q8N878 549 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF454Q8N9F8 522 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 OR9Q2Q8NGE9 314 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 OR8J2Q8NGG1 315 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 C1orf74Q96LT6 269 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 C1QTNF2Q9BXJ5 285 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SHARPINQ9H0F6 387 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 RYDENQ9NUL5 291 aaKnown RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF337Q9Y3M9 751 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SH2D7A6NKC9 451 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 PTAFRP25105 342 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 GKP32189 559 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SUOXP51687 545 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 ARHGAP11BQ3KRB8 267 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 DCAF12L1Q5VU92 463 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 C18orf63Q68DL7 685 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 OR6V1Q8N148 313 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 SIGLECL1Q8N7X8 197 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CNEP1R1Q8N9A8 125 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 TANKQ92844 425 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CDS1Q92903 461 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 OR7D2Q96RA2 312 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 NUDT9Q9BW91 350 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 METTL17Q9H7H0 456 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 PISDQ9UG56 409 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 RCE1Q9Y256 329 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 HEMK1Q9Y5R4 338 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-221ENST00000493795 PSAT1Q9Y617 370 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 CSNK1G3Q9Y6M4 447 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 MBD5Q9P267 1494 aa7.38□□□□□ -1.23
BRCA1-221ENST00000493795 TMEM269A0A1B0GVZ9 245 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 LAMTOR5O43504 91 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 RGS11O94810 467 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF728P0DKX0 622 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 BMP2P12643 396 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 LGALS4P56470 323 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 TATDN3Q17R31 274 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF322Q6U7Q0 402 aaPredicted RBP7.37□□□□□ -1.23
BRCA1-221ENST00000493795 FAM57BQ71RH2 274 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 PRICKLE2Q7Z3G6 844 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 LFNGQ8NES3 379 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 C14orf79Q96F83 325 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 DHRS9Q9BPW9 319 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SUCNR1Q9BXA5 334 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 DUSP22Q9NRW4 184 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 ZNF586Q9NXT0 402 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 NPAP1Q9NZP6 1156 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 CLCF1Q9UBD9 225 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 SALL3Q9BXA9 1300 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 A0A1W2PQU0 124 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 OR2M5A3KFT3 312 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 C17orf105B2RV13 164 aa7.37□□□□□ -1.23
BRCA1-221ENST00000493795 TIMM8AO60220 97 aaPredicted RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms