RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 TMEM114B3SHH9 223 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 AZIN1O14977 448 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 SPRY1O43609 319 aaPredicted RBP15.44■□□□□ 0.06
NUP50-218ENST00000493456 CYP7B1O75881 506 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 URI1O94763 535 aaPredicted RBP15.44■□□□□ 0.06
NUP50-218ENST00000493456 WNT11O96014 354 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 CHEK2O96017 543 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 CSTAP01040 98 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 TFPIP10646 304 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 BCKDHAP12694 445 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 ITGA2P17301 1181 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 NTF4P34130 210 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 FOXG1P55316 489 aaPredicted RBP15.44■□□□□ 0.06
NUP50-218ENST00000493456 SLC25A3Q00325 362 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 ZNF141Q15928 474 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 CCDC153Q494R4 210 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 BHLHB9Q6PI77 547 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 KLHL24Q6TFL4 600 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 OR7A2PQ8NGA2 310 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 OR52E4Q8NGH9 312 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 OR7D2Q96RA2 312 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 SDF2Q99470 211 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 CCDC106Q9BWC9 280 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 BPESC1Q9GZL8 116 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 C12orf65Q9H3J6 166 aaKnown RBP15.44■□□□□ 0.06
NUP50-218ENST00000493456 ATAD3AQ9NVI7 634 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 PARPBPQ9NWS1 579 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 SLC9A8Q9Y2E8 581 aa15.44■□□□□ 0.06
NUP50-218ENST00000493456 PROCP04070 461 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 UBTFL6P0CB48 400 aaPredicted RBP15.43■□□□□ 0.06
NUP50-218ENST00000493456 CFPP27918 469 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 MAPK1P28482 360 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 CLK1P49759 484 aaKnown RBP15.43■□□□□ 0.06
NUP50-218ENST00000493456 PRPS1P60891 318 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 LSM12Q3MHD2 195 aaKnown RBP15.43■□□□□ 0.06
NUP50-218ENST00000493456 GALNTL6Q49A17 601 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 LIPMQ5VYY2 423 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 EIF3MQ7L2H7 374 aaKnown RBP15.43■□□□□ 0.06
NUP50-218ENST00000493456 SLC46A3Q7Z3Q1 461 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 MZB1Q8WU39 189 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 OIT3Q8WWZ8 545 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 C1orf159Q96HA4 380 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 TUBB1Q9H4B7 451 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 OXSMQ9NWU1 459 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 FBXO9Q9UK97 447 aaPredicted RBP15.43■□□□□ 0.06
NUP50-218ENST00000493456 MOKQ9UQ07 419 aa15.43■□□□□ 0.06
NUP50-218ENST00000493456 DUXAA6NLW8 204 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 B9A039 149 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 STX11O75558 287 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 PDE5AO76074 875 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 LINC00032P0C843 101 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 LAMP1P11279 417 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 MPGP29372 298 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 SERPINF1P36955 418 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 SRP14P37108 136 aaKnown RBP15.42■□□□□ 0.06
NUP50-218ENST00000493456 GPR68Q15743 365 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 C9orf135Q5VTT2 229 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 KANK2Q63ZY3 851 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 CCDC103Q8IW40 242 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 OR5D16Q8NGK9 328 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 HPS1Q92902 700 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 ARL5BQ96KC2 179 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 VRK1Q99986 396 aaPredicted RBP15.42■□□□□ 0.06
NUP50-218ENST00000493456 KCNS3Q9BQ31 491 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 SOX7Q9BT81 388 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 ADAM19Q9H013 955 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 HEATR1Q9H583 2144 aaKnown RBP15.42■□□□□ 0.06
NUP50-218ENST00000493456 OBP2BQ9NPH6 170 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 CTPS2Q9NRF8 586 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 TMEFF2Q9UIK5 374 aaPredicted RBP15.42■□□□□ 0.06
NUP50-218ENST00000493456 TRAPPC4Q9Y296 219 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 FIS1Q9Y3D6 152 aa15.42■□□□□ 0.06
NUP50-218ENST00000493456 PLIN3O60664 434 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 EIF1BO60739 113 aaKnown RBP15.41■□□□□ 0.06
NUP50-218ENST00000493456 UGT2B17O75795 530 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 C6orf47O95873 294 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 PAX7P23759 505 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 PPOXP50336 477 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 CHN2P52757 468 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 H3F3AP84243 136 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 TRMT10CQ7L0Y3 403 aaKnown RBP15.41■□□□□ 0.06
NUP50-218ENST00000493456 GRINAQ7Z429 371 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 ANKS4BQ8N8V4 417 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 FAM71CQ8NEG0 241 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 ZNF563Q8TA94 476 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 ZFAND2BQ8WV99 257 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 BOD1Q96IK1 185 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 SLC7A10Q9NS82 523 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 CA10Q9NS85 328 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 KCNE5Q9UJ90 142 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 SLC35A3Q9Y2D2 325 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 DNAJC15Q9Y5T4 150 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 FLVCR1Q9Y5Y0 555 aa15.41■□□□□ 0.06
NUP50-218ENST00000493456 A0A0A6YYJ9 748 aa15.4■□□□□ 0.06
NUP50-218ENST00000493456 SLCO1B7G3V0H7 640 aa15.4■□□□□ 0.06
NUP50-218ENST00000493456 RIPK2O43353 540 aa15.4■□□□□ 0.06
NUP50-218ENST00000493456 LYPLA1O75608 230 aaPredicted RBP15.4■□□□□ 0.06
NUP50-218ENST00000493456 SNUPNO95149 360 aaKnown RBP15.4■□□□□ 0.06
NUP50-218ENST00000493456 TACSTD2P09758 323 aa15.4■□□□□ 0.06
NUP50-218ENST00000493456 CPA3P15088 417 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms