RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 PIGXQ8TBF5 258 aa18.8■□□□□ 0.6
PFDN4-205ENST00000493356 DNAJA3Q96EY1 480 aa18.8■□□□□ 0.6
PFDN4-205ENST00000493356 ARL5BQ96KC2 179 aa18.8■□□□□ 0.6
PFDN4-205ENST00000493356 CCDC106Q9BWC9 280 aa18.8■□□□□ 0.6
PFDN4-205ENST00000493356 PRR14Q9BWN1 585 aa18.8■□□□□ 0.6
PFDN4-205ENST00000493356 TXLNGYQ9BZA5 131 aa18.8■□□□□ 0.6
PFDN4-205ENST00000493356 SERHL2Q9H4I8 314 aa18.8■□□□□ 0.6
PFDN4-205ENST00000493356 ATAD3AQ9NVI7 634 aa18.8■□□□□ 0.6
PFDN4-205ENST00000493356 PIP5K1BO14986 540 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 UGT2B17O75795 530 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 PMS2P2O95744 297 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 FAM153BP0C7A2 387 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 MAPK1P28482 360 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 NR4A2P43354 598 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 PDLIM4P50479 330 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 PHC1P78364 1004 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 SLC25A3Q00325 362 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 FAM153CQ494X1 144 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 OLIG3Q7RTU3 272 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 CCDC103Q8IW40 242 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 NATD1Q8N6N6 113 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 COQ8BQ96D53 544 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 PPP3R2Q96LZ3 170 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 C16orf45Q96MC5 204 aaPredicted RBP18.79■□□□□ 0.6
PFDN4-205ENST00000493356 CTPS2Q9NRF8 586 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 CHRNA9Q9UGM1 479 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 MKLN1Q9UL63 735 aa18.79■□□□□ 0.6
PFDN4-205ENST00000493356 SPIN1Q9Y657 262 aaPredicted RBP18.79■□□□□ 0.6
PFDN4-205ENST00000493356 ATP6V1G2-DDX39BF2Z307 99 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 NDUFS8O00217 210 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 DNPH1O43598 174 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 STX11O75558 287 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 CHRNGP07510 517 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 FGF4P08620 206 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 APOBEC1P41238 236 aaKnown RBP18.78■□□□□ 0.6
PFDN4-205ENST00000493356 HBA1P69905 142 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 PCLAFQ15004 111 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 SWI5Q1ZZU3 235 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 MST1LQ2TV78 715 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 C9orf135Q5VTT2 229 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 BHLHB9Q6PI77 547 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 EIF3MQ7L2H7 374 aaKnown RBP18.78■□□□□ 0.6
PFDN4-205ENST00000493356 C17orf78Q8N4C9 275 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 KRTCAP2Q8N6L1 136 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 FAM71CQ8NEG0 241 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 SORCS2Q96PQ0 1159 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 PIMREGQ9BSJ6 248 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 EML4Q9HC35 981 aaKnown RBP18.78■□□□□ 0.6
PFDN4-205ENST00000493356 SLC17A5Q9NRA2 495 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 AMDHD2Q9Y303 409 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 HDGFL3Q9Y3E1 203 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 FKBP7Q9Y680 259 aa18.78■□□□□ 0.6
PFDN4-205ENST00000493356 DUXAA6NLW8 204 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 COPEO14579 308 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 CFLARO15519 480 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 PEX11AO75192 247 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 LYPLA1O75608 230 aaPredicted RBP18.77■□□□□ 0.6
PFDN4-205ENST00000493356 AK1P00568 194 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 APEHP13798 732 aaKnown RBP18.77■□□□□ 0.6
PFDN4-205ENST00000493356 HNF1AP20823 631 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 SOAT1P35610 550 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 MAPK14Q16539 360 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 ARHGAP11BQ3KRB8 267 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 CASP12Q6UXS9 341 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 HOMEZQ8IX15 550 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 C1orf162Q8NEQ5 155 aaPredicted RBP18.77■□□□□ 0.6
PFDN4-205ENST00000493356 C3orf49Q96BT1 292 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 FBXO17Q96EF6 278 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 C1orf50Q9BV19 199 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 OR11A1Q9GZK7 315 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 ZNF350Q9GZX5 532 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 DCTN4Q9UJW0 460 aa18.77■□□□□ 0.6
PFDN4-205ENST00000493356 IGHV4-61A0A0C4DH41 118 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 ANKRD28O15084 1053 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 TRIM13O60858 407 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 BCAS1O75363 584 aaPredicted RBP18.76■□□□□ 0.59
PFDN4-205ENST00000493356 MATN1P21941 496 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 PGM1P36871 562 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 MAGEA8P43361 318 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 H3F3AP84243 136 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 XKR7Q5GH72 579 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 C6orf120Q7Z4R8 191 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 RIMKLAQ8IXN7 391 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 ZNF563Q8TA94 476 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 FOXN4Q96NZ1 517 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 PRPF18Q99633 342 aaKnown RBP18.76■□□□□ 0.59
PFDN4-205ENST00000493356 BHLHE41Q9C0J9 482 aaPredicted RBP18.76■□□□□ 0.59
PFDN4-205ENST00000493356 SLC7A10Q9NS82 523 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 UPB1Q9UBR1 384 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 MID2Q9UJV3 735 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 MOKQ9UQ07 419 aa18.76■□□□□ 0.59
PFDN4-205ENST00000493356 PRPS1L1P21108 318 aa18.75■□□□□ 0.59
PFDN4-205ENST00000493356 CLK1P49759 484 aaKnown RBP18.75■□□□□ 0.59
PFDN4-205ENST00000493356 OR2B6P58173 313 aa18.75■□□□□ 0.59
PFDN4-205ENST00000493356 SQLEQ14534 574 aa18.75■□□□□ 0.59
PFDN4-205ENST00000493356 C6orf136Q5SQH8 315 aa18.75■□□□□ 0.59
PFDN4-205ENST00000493356 LIPNQ5VXI9 398 aa18.75■□□□□ 0.59
PFDN4-205ENST00000493356 GRINAQ7Z429 371 aa18.75■□□□□ 0.59
PFDN4-205ENST00000493356 ADGRG3Q86Y34 549 aa18.75■□□□□ 0.59
PFDN4-205ENST00000493356 IFT20Q8IY31 132 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms