RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 TMEM178AQ8NBL3 297 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 OR51G2Q8NGK0 314 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 RAPGEF5Q92565 580 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 DYNLL2Q96FJ2 89 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 ZNF479Q96JC4 524 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 RBM14Q96PK6 669 aaKnown RBP4.39□□□□□ -1.71
SND1-216ENST00000492840 COPS8Q99627 209 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 FUCA2Q9BTY2 467 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 TSSK1BQ9BXA7 367 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 C1QTNF4Q9BXJ3 329 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 EIF3KQ9UBQ5 218 aaKnown RBP4.39□□□□□ -1.71
SND1-216ENST00000492840 MAD1L1Q9Y6D9 718 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 C2orf16Q68DN1 1984 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 FANCIQ9NVI1 1328 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 APC2O95996 2303 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 C2CD3Q4AC94 2353 aa4.39□□□□□ -1.71
SND1-216ENST00000492840 DOCK8Q8NF50 2099 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 LRP5LA4QPB2 252 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 NPIPA7E9PJI5 369 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 NPIPB9F8W1W9 429 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 INPP4BO15327 924 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 DFNA5O60443 496 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 N4BP1O75113 896 aaKnown RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 MTRF1O75570 445 aaKnown RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 F10P00742 488 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 SLPIP03973 132 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 SP1P08047 785 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 ZNF806P0C7X5 589 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 NPIPA8P0DM63 369 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 ERVK-10P10266 1014 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 TDGF1P13385 188 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 NMT1P30419 496 aaKnown RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 FDFT1P37268 417 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 MAGEA1P43355 309 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 RPS9P46781 194 aaKnown RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 ART1P52961 327 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 PAX9P55771 341 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 PEX3P56589 373 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 RPS15P62841 145 aaKnown RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 RPS27AP62979 156 aaKnown RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 ILF3Q12906 894 aaKnown RBP eCLIP4.38□□□□□ -1.713e-10■■■■□ 21.8
SND1-216ENST00000492840 SF3A2Q15428 464 aaKnown RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 MLF2Q15773 248 aaPredicted RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 SNAI3Q3KNW1 292 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 TMEM52BQ4KMG9 183 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 XKR7Q5GH72 579 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 RNASEKQ6P5S7 137 aaKnown RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 VITQ6UXI7 678 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 ADAMTSL5Q6ZMM2 481 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 C9orf47Q6ZRZ4 202 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 CYS1Q717R9 158 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 CHMP1BQ7LBR1 199 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 HSD11B1LQ7Z5J1 315 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 TSEN54Q7Z6J9 526 aaKnown RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 BPIFCQ8NFQ6 507 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 OR5L2Q8NGL0 311 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 OR6S1Q8NH40 331 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 CNIH3Q8TBE1 160 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 MAPK15Q8TD08 544 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 CD101Q93033 1021 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 BIRC7Q96CA5 298 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 NTNG2Q96CW9 530 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 C10orf35Q96D05 121 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 DUX5Q96PT3 197 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 SLC38A2Q96QD8 506 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 SLC6A7Q99884 636 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 RIOK1Q9BRS2 568 aaKnown RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 HOXD1Q9GZZ0 328 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 TMEM185BQ9H7F4 350 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 MTHFD2LQ9H903 347 aaPredicted RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 ZNF71Q9NQZ8 489 aaPredicted RBP4.38□□□□□ -1.71
SND1-216ENST00000492840 POLE4Q9NR33 117 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 SLC17A5Q9NRA2 495 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 NYAP2Q9P242 653 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 LNPEPQ9UIQ6 1025 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 NPIPA1Q9UND3 350 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 NPTNQ9Y639 398 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 STK36Q9NRP7 1315 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 MYH15Q9Y2K3 1946 aa4.38□□□□□ -1.71
SND1-216ENST00000492840 SMG1Q96Q15 3661 aaKnown RBP4.37□□□□□ -1.71
SND1-216ENST00000492840 LAMA4Q16363 1823 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 AKAP13Q12802 2813 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 SPAG17Q6Q759 2223 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 BAZ2AQ9UIF9 1905 aaKnown RBP4.37□□□□□ -1.71
SND1-216ENST00000492840 PPIAL4EA0A075B759 164 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 A0A1B0GTQ1 180 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 SPECC1L-ADORA2AF8WAN1 911 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 TAPBPO15533 448 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 PPIHO43447 177 aaKnown RBP4.37□□□□□ -1.71
SND1-216ENST00000492840 NEMFO60524 1076 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 CEACAM4O75871 244 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 AP2A2O94973 939 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 OAZ2O95190 189 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 CAVIN2O95810 425 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 CA1P00915 261 aaPredicted RBP4.37□□□□□ -1.71
SND1-216ENST00000492840 FSHBP01225 129 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 NGFRP08138 427 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 UBTFL1P0CB47 393 aaPredicted RBP4.37□□□□□ -1.71
SND1-216ENST00000492840 HSMCR30P0CW71 290 aa4.37□□□□□ -1.71
SND1-216ENST00000492840 PPIAL4FP0DN26 164 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms