RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 IP6K3Q96PC2 410 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ALPK1Q96QP1 1244 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 IL4I1Q96RQ9 567 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 LMF1Q96S06 567 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 BEX2Q9BXY8 128 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 POLR2J2Q9GZM3 115 aaKnown RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ACTR3BQ9P1U1 418 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 C19orf53Q9UNZ5 99 aaPredicted RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 GRIP1Q9Y3R0 1128 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 PCDHGA7Q9Y5G6 932 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 INTS1Q8N201 2190 aaKnown RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 BLACEA4D250 179 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TRIM64A6NGJ6 449 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TRIM64BA6NI03 449 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 SHISA8B8ZZ34 492 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 H3BSH0 61 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 SULT2B1O00204 365 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF195O14628 629 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 HCN1O60741 890 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ICOSLGO75144 302 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 SLC2A2P11168 524 aaPredicted RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF81P51508 661 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 DCAF7P61962 342 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 PPP2R2BQ00005 443 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 NFATC3Q12968 1075 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 RAB39AQ14964 217 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 OR1C1Q15619 314 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 OR7A5Q15622 319 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 GFOD2Q3B7J2 385 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 DCAF10Q5QP82 559 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 EEF1A1P5Q5VTE0 462 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 UBE2UQ5VVX9 321 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 CPZQ66K79 652 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 DESI1Q6ICB0 168 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 OR2T5Q6IEZ7 315 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 LCN10Q6JVE6 187 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TIPARPQ7Z3E1 657 aaKnown RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 KDM8Q8N371 416 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 AQP11Q8NBQ7 271 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 OR10G3Q8NGC4 313 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 OR5M9Q8NGP3 310 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 OR2T29Q8NH02 315 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 CNOT9Q92600 299 aaKnown RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 S100PBPQ96BU1 408 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 CRELD1Q96HD1 420 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 MAELQ96JY0 434 aaKnown RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 GNRHR2Q96P88 292 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 EPYCQ99645 322 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TTYH2Q9BSA4 534 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TTTY10Q9BZA0 68 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 MMP27Q9H306 513 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF696Q9H7X3 374 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TIGARQ9NQ88 270 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 SACM1LQ9NTJ5 587 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TAS2R7Q9NYW3 318 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 DNAJB9Q9UBS3 223 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 PILRAQ9UKJ1 303 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 YARS2Q9Y2Z4 477 aaKnown RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 MAB21L2Q9Y586 359 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 SPIN1Q9Y657 262 aaPredicted RBP4.13□□□□□ -1.75
TRA2B-215ENST00000492417 ATRXP46100 2492 aa4.13□□□□□ -1.75
TRA2B-215ENST00000492417 TRGV8A0A0C4DH27 118 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 PRAMEF25A6NGN4 478 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 C9orf172C9J069 976 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 J3KTA2 159 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 PLOD2O00469 737 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF264O43296 627 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 TLX3O43711 291 aaPredicted RBP4.12□□□□□ -1.75
TRA2B-215ENST00000492417 PRICKLE3O43900 615 aaPredicted RBP4.12□□□□□ -1.75
TRA2B-215ENST00000492417 SCGNO76038 276 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 APOC3P02656 99 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 GIMD1P0DJR0 217 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 T-ENOLP0DO92 83 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 ITGAMP11215 1152 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 IL32P24001 234 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 MNDAP41218 407 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 AP2S1P53680 142 aaPredicted RBP4.12□□□□□ -1.75
TRA2B-215ENST00000492417 RPS3AP61247 264 aaKnown RBP4.12□□□□□ -1.75
TRA2B-215ENST00000492417 EEF1A1P68104 462 aaKnown RBP4.12□□□□□ -1.75
TRA2B-215ENST00000492417 KCNC4Q03721 635 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 AIMP2Q13155 320 aaKnown RBP4.12□□□□□ -1.75
TRA2B-215ENST00000492417 HAGHLQ6PII5 290 aaPredicted RBP4.12□□□□□ -1.75
TRA2B-215ENST00000492417 ASB18Q6ZVZ8 466 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 OAFQ86UD1 273 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 IGFN1Q86VF2 1251 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 SLC30A8Q8IWU4 369 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF100Q8IYN0 542 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 CARFQ8N187 725 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 CISD2Q8N5K1 135 aaKnown RBP4.12□□□□□ -1.75
TRA2B-215ENST00000492417 ARL6IP6Q8N6S5 226 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 BCORP1Q8N888 145 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 TMEM102Q8N9M5 508 aaPredicted RBP4.12□□□□□ -1.75
TRA2B-215ENST00000492417 C7orf57Q8NEG2 295 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 OR5K1Q8NHB7 308 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 VOPP1Q96AW1 172 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF597Q96LX8 424 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 TBX5Q99593 518 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 TUBA1CQ9BQE3 449 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 SLC30A2Q9BRI3 323 aa4.12□□□□□ -1.75
TRA2B-215ENST00000492417 MND1Q9BWT6 205 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms