RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 PRR27Q6MZM9 219 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 PRMT9Q6P2P2 845 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 ZCCHC23Q6ZST2 131 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 IL17RELQ6ZVW7 336 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 UTS2BQ765I0 119 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 TRIM69Q86WT6 500 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 CADM3Q8N126 398 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 CLEC4FQ8N1N0 589 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 FAM86B1Q8N7N1 296 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 CCNYL1Q8N7R7 359 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 COLGALT1Q8NBJ5 622 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 C19orf18Q8NEA5 215 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 OR10H4Q8NGA5 316 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 CACNG8Q8WXS5 425 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 HAS2Q92819 552 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 RCN3Q96D15 328 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 ORAI1Q96D31 301 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 ECHDC3Q96DC8 303 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 PPP1R16AQ96I34 528 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 SLC45A3Q96JT2 553 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 NSMCE3Q96MG7 304 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 RNF157Q96PX1 679 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 C6orf62Q9GZU0 229 aaPredicted RBP4.33□□□□□ -1.72
RTN4-215ENST00000491592 COA1Q9GZY4 146 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 GBA3Q9H227 469 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 FAM124BQ9H5Z6 455 aaPredicted RBP4.33□□□□□ -1.72
RTN4-215ENST00000491592 ZNF385DQ9H6B1 395 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 ANKRA2Q9H9E1 313 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 CALHM2Q9HA72 323 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 ANKHQ9HCJ1 492 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 LYRM4Q9HD34 91 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 CNGB3Q9NQW8 809 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 PXMP2Q9NR77 195 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 ANKRD10Q9NXR5 420 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 PLEK2Q9NYT0 353 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 MSRB1Q9NZV6 116 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 TXNDC16Q9P2K2 825 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 B9D1Q9UPM9 204 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 PCDHAC2Q9Y5I4 1007 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 HEY1Q9Y5J3 304 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 UBIAD1Q9Y5Z9 338 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 CPQQ9Y646 472 aa4.33□□□□□ -1.72
RTN4-215ENST00000491592 NRAPQ86VF7 1730 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PPIAL4EA0A075B759 164 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 LOC105371242A0A075B767 164 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 TRBV11-1A0A0K0K1C0 115 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 MEX3AA1L020 520 aaKnown RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 ISPDA4D126 451 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 BBIP1A8MTZ0 92 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 HACD1B0YJ81 288 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 CLDN5O00501 218 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 CLOCKO15516 846 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 CFLARO15519 480 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 OR10H2O60403 315 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PIAS1O75925 651 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 VAPBO95292 243 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 SYNGR4O95473 234 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 LCKP06239 509 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 APRTP07741 180 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 STSP08842 583 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PPIAL4FP0DN26 164 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ENO3P13929 434 aaPredicted RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 PGAM1P18669 254 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ATF6P18850 670 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 CD22P20273 847 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 EDN2P20800 178 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 MIPP30301 263 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 P2RY2P41231 377 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 SLC6A8P48029 635 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 CSNK1DP48730 415 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 LHX1P48742 406 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ARRB1P49407 418 aaPredicted RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 ATP4BP51164 291 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 TPMTP51580 245 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PKNOX1P55347 436 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 RAB4BP61018 213 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 DYNLT1P63172 113 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 CDK3Q00526 305 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PAX5Q02548 391 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ZFP36L1Q07352 338 aaKnown RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 SREBF2Q12772 1141 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 CDC20Q12834 499 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 TRAF2Q12933 501 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 BNIP2Q12982 314 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 NME3Q13232 169 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 ITGADQ13349 1161 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 KRR1Q13601 381 aaKnown RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 ELAVL3Q14576 367 aaKnown RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 RBMS2Q15434 407 aaKnown RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 TSC22D1Q15714 1073 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 INPP5JQ15735 1006 aaPredicted RBP4.32□□□□□ -1.72
RTN4-215ENST00000491592 EXT1Q16394 746 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PSMD5Q16401 504 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 NRF1Q16656 503 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 PTPN20Q4JDL3 420 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 KLHL22Q53GT1 634 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 C2CD6Q53TS8 623 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 C6orf226Q5I0X4 101 aa4.32□□□□□ -1.72
RTN4-215ENST00000491592 SPANXN3Q5MJ09 141 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms