RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 ZFAND5O76080 213 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 SPARCP09486 303 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 GNALP38405 381 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 FASLGP48023 281 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 RIDAP52758 137 aaKnown RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 EMP3P54852 163 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 CLRN1P58418 232 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 DCDP81605 110 aaKnown RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 DLX2Q07687 328 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 RIPPLY1Q0D2K3 151 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 RASGEF1BQ0VAM2 473 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 NUMA1Q14980 2115 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 ZNF658BQ4V348 819 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 MORN4Q8NDC4 146 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 OR5AK2Q8NH90 309 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 CEP76Q8TAP6 659 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 APH1BQ8WW43 257 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 TM4SF19Q96DZ7 209 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 ZNF717Q9BY31 904 aaPredicted RBP6.79□□□□□ -1.32
NPHP3-208ENST00000490993 B3GAT2Q9NPZ5 323 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 IL20Q9NYY1 176 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 CLEC2DQ9UHP7 191 aa6.79□□□□□ -1.32
NPHP3-208ENST00000490993 TRAV36DV7A0A075B6V5 113 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 TMX2-CTNND1H3BSU7 103 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ZNF20P17024 532 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 HSD11B1P28845 292 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 GALNSP34059 522 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 GDI2P50395 445 aaKnown RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ZP2Q05996 745 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 SLC25A30Q5SVS4 291 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 PYHIN1Q6K0P9 492 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 BPHLQ86WA6 291 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 MEIOBQ8N635 442 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ASB17Q8WXJ9 295 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 EDAQ92838 391 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 PLEKHA1Q9HB21 404 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 POLE4Q9NR33 117 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 KLF15Q9UIH9 416 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ACAD8Q9UKU7 415 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 IGKV1-8A0A0C4DH67 115 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 A0A1B0GVG6 124 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 PRICKLE3O43900 615 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 MT-ATP6P00846 226 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 UCHL1P09936 223 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 NUP62P37198 522 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 RPS25P62851 125 aaKnown RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 FGFBP1Q14512 234 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 LIN54Q6MZP7 749 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 PHC2Q8IXK0 858 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 SLC35F3Q8IY50 421 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 PRR22Q8IZ63 422 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ZBTB8BQ8NAP8 495 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 PFN4Q8NHR9 129 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 NAA11Q9BSU3 229 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 LAT2Q9GZY6 243 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 CD93Q9NPY3 652 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ABRACLQ9P1F3 81 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 UGT2A1Q9Y4X1 527 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 PCDHGA3Q9Y5H0 932 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 PCYT1BQ9Y5K3 369 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 COL4A4P53420 1690 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 CHD5Q8TDI0 1954 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 IQCMA0A1B0GVH7 501 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 KRBA1A5PL33 1030 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 FRG2CA6NGY1 282 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 NUDT21O43809 227 aaKnown RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 SCRG1O75711 98 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 IGFBP1P08833 259 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 HOXB3P14651 431 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 FUT4P22083 530 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ETV5P41161 510 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ETV1P50549 477 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 AQP6Q13520 282 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 MAPK14Q16539 360 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 TP53I3Q53FA7 332 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ACSM3Q53FZ2 586 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 FAM205BPQ63HN1 556 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ZNF322Q6U7Q0 402 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ASB18Q6ZVZ8 466 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 LNX2Q8N448 690 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 DHRS1Q96LJ7 313 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ZNF681Q96N22 645 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 OPALINQ96PE5 141 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 INTS14Q96SY0 518 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 PHOX2BQ99453 314 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 WACQ9BTA9 647 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 ACTR6Q9GZN1 396 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 CENPMQ9NSP4 180 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 COPZ2Q9P299 210 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 SMIM30A4D0T7 59 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 IGHEP01854 428 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 TACR3P29371 465 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 GALEQ14376 348 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 CARTPTQ16568 116 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 RNASE12Q5GAN4 147 aaKnown RBP6.78□□□□□ -1.32
NPHP3-208ENST00000490993 EMC4Q5J8M3 183 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 FAM69BQ5VUD6 431 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 TMPRSS11FQ6ZWK6 438 aa6.78□□□□□ -1.32
NPHP3-208ENST00000490993 BCDIN3DQ7Z5W3 292 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms