RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 SLC25A43Q8WUT9 341 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ARL8AQ96BM9 186 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 USB1Q9BQ65 265 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 POTEKPQ9BYX7 375 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 TRIM2Q9C040 744 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 OR11A1Q9GZK7 315 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 CENPHQ9H3R5 247 aa17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 ESRP2Q9H6T0 727 aaKnown RBP17.15■□□□□ 0.34
TNFRSF1B-202ENST00000489921 AP3D1O14617 1153 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CLOCKO15516 846 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 SNNO75324 88 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PMS2P2O95744 297 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CD3EP07766 207 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 RPS4Y1P22090 263 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CHI3L1P36222 383 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ATP5J2P56134 94 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CSNK2A1P68400 391 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 H3F3AP84243 136 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PGGHGQ32M88 737 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 GPAT3Q53EU6 434 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 COX20Q5RI15 118 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 GRINAQ7Z429 371 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 KIRREL3Q8IZU9 778 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ZNF433Q8N7K0 673 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 KBTBD8Q8NFY9 601 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ZNF563Q8TA94 476 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 FBXW5Q969U6 566 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TRNT1Q96Q11 434 aaKnown RBP17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 WDR55Q9H6Y2 383 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 SLC6A13Q9NSD5 602 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 NPAP1Q9NZP6 1156 aa17.14■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CUBNO60494 3623 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 FBN1P35555 2871 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 GOLGA8QA0A0J9YX86 632 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 GOLGA8OA6NCC3 632 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 AGAP5A6NIR3 686 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 GOLGA8NF8WBI6 632 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ZNF500O60304 480 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CD8AP01732 235 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PGRP06401 933 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 EPHA3P29320 983 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 IDH2P48735 452 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 MVDP53602 400 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 RPS4XP62701 263 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 KRTAP1-1Q07627 177 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TNK1Q13470 666 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 SPATA19Q7Z5L4 167 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PRIMA1Q86XR5 153 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CCDC103Q8IW40 242 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ARFGAP2Q8N6H7 521 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 SMAP2Q8WU79 429 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PAIP2Q9BPZ3 127 aaKnown RBP17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 NGBQ9NPG2 151 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 HDGFL3Q9Y3E1 203 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 MAGED1Q9Y5V3 778 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 HIVEP2P31629 2446 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CR1P17927 2039 aa17.13■□□□□ 0.33
TNFRSF1B-202ENST00000489921 SHISA9B4DS77 424 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 GSNP06396 782 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TFPIP10646 304 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CLK1P49759 484 aaKnown RBP17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 SLC16A1P53985 500 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 FOXG1P55316 489 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PPA1Q15181 289 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TIMM23BQ5SRD1 257 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 FBXW9Q5XUX1 488 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 LRRC74BQ6ZQY2 392 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ZNF100Q8IYN0 542 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 OR52E6Q96RD3 313 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PANX1Q96RD7 426 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 OSGIN1Q9UJX0 560 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 LIPT1Q9Y234 373 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TRAPPC4Q9Y296 219 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PLCE1Q9P212 2302 aa17.12■□□□□ 0.33
TNFRSF1B-202ENST00000489921 OR5H1A6NKK0 313 aa17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 HDAC3O15379 428 aa17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 DNPH1O43598 174 aa17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 IGHV3-9P01782 118 aa17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 IMPDH2P12268 514 aa17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 FKBP2P26885 142 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 STK11Q15831 433 aa17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ZNF621Q6ZSS3 439 aa17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CMIPQ8IY22 773 aa17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ANKRD42Q8N9B4 389 aa17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 PNPT1Q8TCS8 783 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 MAELQ96JY0 434 aaKnown RBP17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 MTHFD2LQ9H903 347 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 THAP1Q9NVV9 213 aa17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 SPIN1Q9Y657 262 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TMED7-TICAM2A0A0A6YYA0 188 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TMEM120BA0PK00 339 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 TMEM72A0PK05 275 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 ZC3H12DA2A288 527 aaKnown RBP17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 FAAHO00519 579 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 GGT1P19440 569 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CCNA2P20248 432 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 CDKN1AP38936 164 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 HHATQ5VTY9 493 aa17.1■□□□□ 0.33
TNFRSF1B-202ENST00000489921 DNM1P46Q6ZS02 220 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms