RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 DCST1Q5T197 706 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CYB5R2Q6BCY4 276 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 HEPHL1Q6MZM0 1159 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TSSK4Q6SA08 328 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SMARCD3Q6STE5 483 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 IL20RBQ6UXL0 311 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 APOOLQ6UXV4 268 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC36A4Q6YBV0 504 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ARMCX2Q7L311 632 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 GPRIN1Q7Z2K8 1008 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM200AQ86VY9 491 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 PARGQ86W56 976 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC30A8Q8IWU4 369 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MRPL41Q8IXM3 137 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 LRRC56Q8IYG6 542 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 GTPBP8Q8N3Z3 284 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 PRR18Q8N4B5 295 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 HORMAD2Q8N7B1 307 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 BOLLQ8N9W6 283 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SIDT2Q8NBJ9 832 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 POGLUT1Q8NBL1 392 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 BEND2Q8NDZ0 799 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 DNAAF1Q8NEP3 725 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SDR9C7Q8NEX9 313 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 OR2L5Q8NG80 312 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 OR2AK2Q8NG84 335 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 OR5M1Q8NGP8 315 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 OR2G2Q8NGZ5 317 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 OR10J5Q8NHC4 309 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CD200R1Q8TD46 325 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 DTD1Q8TEA8 209 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CA5BP1Q8WTZ4 195 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 UBTD2Q8WUN7 234 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MYLIPQ8WY64 445 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MARS2Q96GW9 593 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MRGPRX3Q96LB0 322 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 LRFN5Q96NI6 719 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TRIB3Q96RU7 358 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CLCC1Q96S66 551 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 C19orf43Q9BQ61 176 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 NAA11Q9BSU3 229 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 JAM3Q9BX67 310 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 CHST5Q9GZS9 411 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ABCG8Q9H221 673 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 SEMA6CQ9H3T2 930 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 NCOR1P1Q9H4R4 102 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM38AQ9H6F2 299 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 TMEM185BQ9H7F4 350 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 KCNK12Q9HB15 430 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 RRAGCQ9HB90 399 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 NT5MQ9NPB1 228 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MYOZ2Q9NPC6 264 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MMP26Q9NRE1 261 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 ASF1BQ9NVP2 202 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 NLE1Q9NVX2 485 aaPredicted RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 C2orf42Q9NWW7 574 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 GAR1Q9NY12 217 aaKnown RBP4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 PCDHB1Q9Y5F3 818 aa4.42□□□□□ -1.7
SNRNP40-206ENST00000489853 MGAMO43451 1857 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 DOCK1Q14185 1865 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 TRBV4-1A0A0J9YWV2 114 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 CXorf65A6NEN9 183 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ANKRD61A6NGH8 418 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 OR6C76A6NM76 312 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 GABARAPH6UMI1 98 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 H7C1Q1 480 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ADAM10O14672 748 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 FFAR1O14842 300 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 EMC8O43402 210 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 OR10H3O60404 316 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 FADS1O60427 444 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 BEST1O76090 585 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 SOX14O95416 240 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 CLDN9O95484 217 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 PTBP3O95758 552 aaKnown RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ACTL6AO96019 429 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 F2P00734 622 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 PDYNP01213 254 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 OPN1SWP03999 348 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 OR12D1P0DN82 309 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ETFAP13804 333 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 COX7A2P14406 83 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 GJA1P17302 382 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 AMD1P17707 334 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 LMO2P25791 158 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 SHC1P29353 583 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 MAT2AP31153 395 aaKnown RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 MAPK9P45984 424 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 TTPAP49638 278 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 LUMP51884 338 aaPredicted RBP4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 SLC7A9P82251 487 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 SORDQ00796 357 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ID3Q02535 119 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 TLE2Q04725 743 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 GAB1Q13480 694 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 SCARB2Q14108 478 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 INSL4Q14641 139 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 TEAD2Q15562 447 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 HMGN3Q15651 99 aa4.41□□□□□ -1.7
SNRNP40-206ENST00000489853 ZNF630Q2M218 657 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms