RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 FBLIM1Q8WUP2 373 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 PLA2G12AQ9BZM1 189 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 TMED7-TICAM2A0A0A6YYA0 188 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 FAM47E-STBD1D6RA91 191 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 SOX8P57073 446 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 CDC20Q12834 499 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 CTU2Q2VPK5 515 aaKnown RBP19.66■□□□□ 0.74
SMC4-221ENST00000489573 BROXQ5VW32 411 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 POMZP3Q6PJE2 187 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 PSD4Q8NDX1 1056 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 OR13C2Q8NGS9 318 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 FANK1Q8TC84 345 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 KCNE4Q8WWG9 221 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 OSTF1Q92882 214 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 FGF11Q92914 225 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 TMEM41AQ96HV5 264 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 PTGES2Q9H7Z7 377 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 SLC25A19Q9HC21 320 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 TBC1D23Q9NUY8 699 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 FBXL2Q9UKC9 423 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 WASF3Q9UPY6 502 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 POLHQ9Y253 713 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 VDAC3Q9Y277 283 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 MYRFQ9Y2G1 1151 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 TMED7Q9Y3B3 224 aa19.66■□□□□ 0.74
SMC4-221ENST00000489573 ETV2O00321 342 aaPredicted RBP19.65■□□□□ 0.74
SMC4-221ENST00000489573 FUT1P19526 365 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 CCNA2P20248 432 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 MASP1P48740 699 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 TUBA3CQ13748 450 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 MAD2L1BPQ15013 274 aaPredicted RBP19.65■□□□□ 0.74
SMC4-221ENST00000489573 C12orf73Q69YU5 71 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 RPL13AP3Q6NVV1 102 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 TUBA3EQ6PEY2 450 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 ZNF227Q86WZ6 799 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 ENTHD1Q8IYW4 607 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 OR8D4Q8NGM9 314 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 UTP23Q9BRU9 249 aaKnown RBP19.65■□□□□ 0.74
SMC4-221ENST00000489573 ZNF696Q9H7X3 374 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 IMPAD1Q9NX62 359 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 IL20Q9NYY1 176 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 LRFN1Q9P244 771 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 RNF6Q9Y252 685 aa19.65■□□□□ 0.74
SMC4-221ENST00000489573 EIF4E1BA6NMX2 242 aaKnown RBP19.64■□□□□ 0.73
SMC4-221ENST00000489573 G3V3Y1 287 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 SUSD5O60279 629 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 SLC25A12O75746 678 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 OR7A10O76100 309 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 ELK4P28324 431 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 CD96P40200 585 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 GIPRP48546 466 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 SMSP52788 366 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 CDK5Q00535 292 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 EGR4Q05215 589 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 FOXF1Q12946 379 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 GINS1Q14691 196 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 PLPPR5Q32ZL2 321 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 SLC25A53Q5H9E4 307 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 LINC00696Q6ZRV3 163 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 ADGRG3Q86Y34 549 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 IQCF1Q8N6M8 205 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 C1GALT1C1Q96EU7 318 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 YTHDF1Q9BYJ9 559 aaKnown RBP19.64■□□□□ 0.73
SMC4-221ENST00000489573 OR52D1Q9H346 318 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 TIMMDC1Q9NPL8 285 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 GPR83Q9NYM4 423 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 SIGLEC7Q9Y286 467 aa19.64■□□□□ 0.73
SMC4-221ENST00000489573 CACNA1AO00555 2505 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 DOCK10Q96BY6 2186 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 TMEM72A0PK05 275 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 CDK2AP1O14519 115 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 HCN1O60741 890 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 RCBTB2O95199 551 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 WISP1O95388 367 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 CH25HO95992 272 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 APOBEC1P41238 236 aaKnown RBP19.63■□□□□ 0.73
SMC4-221ENST00000489573 CDK5R2Q13319 367 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 C6orf141Q5SZD1 244 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 AGAP7PQ5VUJ5 663 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 SLC27A4Q6P1M0 643 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 SLC46A3Q7Z3Q1 461 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 OAFQ86UD1 273 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 ZNF248Q8NDW4 579 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 OR1J4Q8NGS1 313 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 CNIH3Q8TBE1 160 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 HDAC2Q92769 488 aaKnown RBP19.63■□□□□ 0.73
SMC4-221ENST00000489573 MRGPRX4Q96LA9 322 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 AGAP4Q96P64 663 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 TSSK6Q9BXA6 273 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 RASSF1Q9NS23 344 aa19.63■□□□□ 0.73
SMC4-221ENST00000489573 MED19A0JLT2 244 aaPredicted RBP19.62■□□□□ 0.73
SMC4-221ENST00000489573 A6NL46 340 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 TRIM3O75382 744 aaPredicted RBP19.62■□□□□ 0.73
SMC4-221ENST00000489573 F10P00742 488 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 SLC9A3P48764 834 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 DNASE1L1P49184 302 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 KCTD21Q4G0X4 260 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 CLEC12AQ5QGZ9 265 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 TIGD3Q6B0B8 471 aa19.62■□□□□ 0.73
SMC4-221ENST00000489573 CASP12Q6UXS9 341 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms