RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 NDRG4Q9ULP0 352 aaKnown RBP18.95■□□□□ 0.62
SND1-214ENST00000489417 VDAC3Q9Y277 283 aa18.95■□□□□ 0.62
SND1-214ENST00000489417 TMED7Q9Y3B3 224 aa18.95■□□□□ 0.62
SND1-214ENST00000489417 A0A0G2JMM0 328 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 A0A1W2PPB8 328 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 A0A1W2PRS3 328 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 UNC119BA6NIH7 251 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 KIR3DP1A8MWS1 328 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 EFCAB9A8MZ26 197 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 CDC42EP2O14613 210 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 SLC25A12O75746 678 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 WISP1O95388 367 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 CCNA2P20248 432 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 CNR1P21554 472 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 POU1F1P28069 291 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 SLC25A53Q5H9E4 307 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 Q6ZPB1 254 aaPredicted RBP18.94■□□□□ 0.62
SND1-214ENST00000489417 HRASLS5Q96KN8 279 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 JSRP1Q96MG2 331 aaPredicted RBP18.94■□□□□ 0.62
SND1-214ENST00000489417 MUS81Q96NY9 551 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 RNF32Q9H0A6 362 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 CCDC86Q9H6F5 360 aaKnown RBP18.94■□□□□ 0.62
SND1-214ENST00000489417 UBAP1Q9NZ09 502 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 SSUH2Q9Y2M2 353 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 KCNMB2Q9Y691 235 aa18.94■□□□□ 0.62
SND1-214ENST00000489417 A0A087WZY1 265 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 TMEM72A0PK05 275 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 HTR3EA5X5Y0 456 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 OR5H15A6NDH6 313 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 H3BN98 237 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 SUSD5O60279 629 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 IGF2P01344 180 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 IGFBP1P08833 259 aaPredicted RBP18.93■□□□□ 0.62
SND1-214ENST00000489417 APOBEC1P41238 236 aaKnown RBP18.93■□□□□ 0.62
SND1-214ENST00000489417 RPS6KA3P51812 740 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 ZNF691Q5VV52 312 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 KRT80Q6KB66 452 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 ADGRG3Q86Y34 549 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 KIF18BQ86Y91 864 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 C8orf59Q8N0T1 100 aaPredicted RBP18.93■□□□□ 0.62
SND1-214ENST00000489417 MRGPRX4Q96LA9 322 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 NPAS1Q99742 590 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 DEPPQ9NTK1 212 aa18.93■□□□□ 0.62
SND1-214ENST00000489417 ZAR1LA6NP61 321 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 SAGP10523 405 aaPredicted RBP18.92■□□□□ 0.62
SND1-214ENST00000489417 GGT2P36268 569 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 GPR85P60893 370 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 EGR4Q05215 589 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 PTGES3Q15185 160 aaKnown RBP18.92■□□□□ 0.62
SND1-214ENST00000489417 ZNF620Q6ZNG0 422 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 CLDN22Q8N7P3 220 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 MDS2Q8NDY4 140 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 SETD9Q8NE22 299 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 FDCSPQ8NFU4 85 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 POC1BQ8TC44 478 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 GNRHR2Q96P88 292 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 NR1H4Q96RI1 486 aaPredicted RBP18.92■□□□□ 0.62
SND1-214ENST00000489417 EGLN3Q9H6Z9 239 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 CDH10Q9Y6N8 788 aa18.92■□□□□ 0.62
SND1-214ENST00000489417 CBR3O75828 277 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 OR7A10O76100 309 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 ADRB1P08588 477 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 FUT1P19526 365 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 DPP4P27487 766 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 DSCR4P56555 118 aaPredicted RBP18.91■□□□□ 0.62
SND1-214ENST00000489417 CCDC81Q6ZN84 652 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 THAP5Q7Z6K1 395 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 SPACA3Q8IXA5 215 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 OR13C2Q8NGS9 318 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 TEX47Q8TBZ9 253 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 HAS2Q92819 552 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 ZBTB8AQ96BR9 441 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 APOL4Q9BPW4 351 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 FAM173AQ9BQD7 235 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 TUBA8Q9NY65 449 aaPredicted RBP18.91■□□□□ 0.62
SND1-214ENST00000489417 DKKL1Q9UK85 242 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 PCDHGB5Q9Y5G0 923 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 PIEZO1Q92508 2521 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 AKAP13Q12802 2813 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 LRRC3CA6NJW4 275 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 A8MVM7 634 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 SHISA8B8ZZ34 492 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 CEACAM4O75871 244 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 CH25HO95992 272 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 RPSAP08865 295 aaKnown RBP18.91■□□□□ 0.62
SND1-214ENST00000489417 EIF2S3P41091 472 aaKnown RBP18.91■□□□□ 0.62
SND1-214ENST00000489417 EIF1P41567 113 aaKnown RBP18.91■□□□□ 0.62
SND1-214ENST00000489417 NUP107P57740 925 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 ARG2P78540 354 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 UGT2A3Q6UWM9 527 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 SLC46A3Q7Z3Q1 461 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 FANK1Q8TC84 345 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 STK35Q8TDR2 534 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 OSTF1Q92882 214 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 PLA2G12AQ9BZM1 189 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 CHRNA9Q9UGM1 479 aa18.91■□□□□ 0.62
SND1-214ENST00000489417 BOKQ9UMX3 212 aaPredicted RBP18.91■□□□□ 0.62
SND1-214ENST00000489417 TRAV36DV7A0A075B6V5 113 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 HCN1O60741 890 aa18.9■□□□□ 0.62
SND1-214ENST00000489417 SP1P08047 785 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms