RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 HS3ST6Q96QI5 342 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 ZNF300Q96RE9 604 aaPredicted RBP22.21■■□□□ 1.15
HMGN1-217ENST00000489072 SLC25A37Q9NYZ2 338 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 CALML5Q9NZT1 146 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 CCDC167Q9P0B6 97 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 SLAMF8Q9P0V8 285 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 KLHL9Q9P2J3 617 aa22.21■■□□□ 1.15
HMGN1-217ENST00000489072 SPIN1Q9Y657 262 aaPredicted RBP22.21■■□□□ 1.15
HMGN1-217ENST00000489072 VPS13CQ709C8 3753 aa22.2■■□□□ 1.14
HMGN1-217ENST00000489072 CDHR4A6H8M9 788 aa22.2■■□□□ 1.14
HMGN1-217ENST00000489072 CLIC1O00299 241 aa22.2■■□□□ 1.14
HMGN1-217ENST00000489072 NR5A2O00482 541 aa22.2■■□□□ 1.14
HMGN1-217ENST00000489072 FAAHO00519 579 aa22.2■■□□□ 1.14
HMGN1-217ENST00000489072 CCNA2P20248 432 aa22.2■■□□□ 1.14
HMGN1-217ENST00000489072 PSMB1P20618 241 aaKnown RBP22.2■■□□□ 1.14
HMGN1-217ENST00000489072 CSNK2A1P68400 391 aaPredicted RBP22.2■■□□□ 1.14
HMGN1-217ENST00000489072 CXorf67Q86X51 503 aaPredicted RBP22.2■■□□□ 1.14
HMGN1-217ENST00000489072 GABRG1Q8N1C3 465 aa22.2■■□□□ 1.14
HMGN1-217ENST00000489072 ZNF775Q96BV0 537 aaPredicted RBP22.2■■□□□ 1.14
HMGN1-217ENST00000489072 SPDL1Q96EA4 605 aa22.2■■□□□ 1.14
HMGN1-217ENST00000489072 THOC1Q96FV9 657 aaKnown RBP22.2■■□□□ 1.14
HMGN1-217ENST00000489072 TACO1Q9BSH4 297 aaKnown RBP22.2■■□□□ 1.14
HMGN1-217ENST00000489072 ACTR6Q9GZN1 396 aa22.2■■□□□ 1.14
HMGN1-217ENST00000489072 OSGIN1Q9UJX0 560 aa22.2■■□□□ 1.14
HMGN1-217ENST00000489072 FLNAP21333 2647 aaKnown RBP22.19■■□□□ 1.14
HMGN1-217ENST00000489072 TMED7-TICAM2A0A0A6YYA0 188 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 CFAP73A6NFT4 308 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 PPP3CBP16298 524 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 EDNRAP25101 427 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 KEAP1Q14145 624 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 LIN52Q52LA3 116 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 PAGE3Q5JUK9 113 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 LRIF1Q5T3J3 769 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 ABLIM2Q6H8Q1 611 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 MAL2Q969L2 176 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 FANCFQ9NPI8 374 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 THUMPD1Q9NXG2 353 aaKnown RBP22.19■■□□□ 1.14
HMGN1-217ENST00000489072 ZNF443Q9Y2A4 671 aaPredicted RBP22.19■■□□□ 1.14
HMGN1-217ENST00000489072 GPR52Q9Y2T5 361 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 TMED7Q9Y3B3 224 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 HDGFL3Q9Y3E1 203 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 CHST2Q9Y4C5 530 aa22.19■■□□□ 1.14
HMGN1-217ENST00000489072 RAI1Q7Z5J4 1906 aaPredicted RBP22.18■■□□□ 1.14
HMGN1-217ENST00000489072 TMEM72A0PK05 275 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 ZNF814B7Z6K7 855 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 KLF4O43474 513 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 PMS2P2O95744 297 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 GKN3PP0CG01 181 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 BMP2P12643 396 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 CD53P19397 219 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 TACR3P29371 465 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 ACAA2P42765 397 aaKnown RBP22.18■■□□□ 1.14
HMGN1-217ENST00000489072 SLC1A3P43003 542 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 HTR3AP46098 478 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 ATP4BP51164 291 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 POLR2HP52434 150 aaKnown RBP22.18■■□□□ 1.14
HMGN1-217ENST00000489072 TSC22D1Q15714 1073 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 AGKQ53H12 422 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 MTDHQ86UE4 582 aaKnown RBP22.18■■□□□ 1.14
HMGN1-217ENST00000489072 CLIP4Q8N3C7 705 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 ALPK1Q96QP1 1244 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 A4GALTQ9NPC4 353 aa22.18■■□□□ 1.14
HMGN1-217ENST00000489072 SETD2Q9BYW2 2564 aaPredicted RBP22.17■■□□□ 1.14
HMGN1-217ENST00000489072 A0A0G2JPF8 293 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 ZNF724A8MTY0 619 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 HNRNPCL2B2RXH8 293 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 HNRNPCL3B7ZW38 293 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 HNRNPCL1O60812 293 aaKnown RBP22.17■■□□□ 1.14
HMGN1-217ENST00000489072 HNRNPCL4P0DMR1 293 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 OR3A2P47893 321 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 CLK1P49759 484 aaKnown RBP22.17■■□□□ 1.14
HMGN1-217ENST00000489072 FADDQ13158 208 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 SQLEQ14534 574 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 DEFB113Q30KQ7 82 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 RNF220Q5VTB9 566 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 ZC3HAV1Q7Z2W4 902 aaKnown RBP22.17■■□□□ 1.14
HMGN1-217ENST00000489072 ZNF440Q8IYI8 595 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 C10orf111Q8N326 155 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 ADAM19Q9H013 955 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 OR10A4Q9H209 315 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 RAD21L1Q9H4I0 556 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 PRSS50Q9UI38 385 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 ARID1AO14497 2285 aa22.17■■□□□ 1.14
HMGN1-217ENST00000489072 TRBV5-3A0A0A0MS03 114 aa22.16■■□□□ 1.14
HMGN1-217ENST00000489072 ADAP00813 363 aa22.16■■□□□ 1.14
HMGN1-217ENST00000489072 THBS1P07996 1170 aa22.16■■□□□ 1.14
HMGN1-217ENST00000489072 PRG2P13727 222 aa22.16■■□□□ 1.14
HMGN1-217ENST00000489072 FKBP2P26885 142 aaKnown RBP22.16■■□□□ 1.14
HMGN1-217ENST00000489072 STON2Q8WXE9 905 aa22.16■■□□□ 1.14
HMGN1-217ENST00000489072 S100PBPQ96BU1 408 aa22.16■■□□□ 1.14
HMGN1-217ENST00000489072 TMEM45AQ9NWC5 275 aa22.16■■□□□ 1.14
HMGN1-217ENST00000489072 VAPAQ9P0L0 249 aa22.16■■□□□ 1.14
HMGN1-217ENST00000489072 DSCAMO60469 2012 aa22.16■■□□□ 1.14
HMGN1-217ENST00000489072 IGKV3D-15A0A087WSY6 115 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP22.15■■□□□ 1.14
HMGN1-217ENST00000489072 ZC3H12DA2A288 527 aaKnown RBP22.15■■□□□ 1.14
HMGN1-217ENST00000489072 TMEM247A6NEH6 219 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 ZNF716A6NP11 495 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 ZNF208O43345 1280 aa22.15■■□□□ 1.14
HMGN1-217ENST00000489072 EDF1O60869 148 aaKnown RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms