RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 DIO1P49895 249 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 CTBP2P56545 445 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 CDK6Q00534 326 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 SELPLGQ14242 412 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 RNPS1Q15287 305 aaKnown RBP14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 ZSWIM7Q19AV6 140 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 COMTD1Q86VU5 262 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 TUSC5Q8IXB3 177 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 SLC43A2Q8N370 569 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 NFKBIDQ8NI38 313 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 REXO5Q96IC2 774 aaKnown RBP14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 DACH2Q96NX9 599 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 GPATCH1Q9BRR8 931 aaKnown RBP14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 OR11A1Q9GZK7 315 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 KLHL13Q9P2N7 655 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 TMED7Q9Y3B3 224 aa14.21□□□□□ -0.13
CTDSP1-209ENST00000488627 SPG11Q96JI7 2443 aa14.21□□□□□ -0.14
CTDSP1-209ENST00000488627 TMEM72A0PK05 275 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 EVPLLA8MZ36 301 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 ANGPT2O15123 496 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 ZNF208O43345 1280 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 CYTIPO60759 359 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 POLR2HP52434 150 aaKnown RBP14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 KLF10Q13118 480 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 ZNF311Q5JNZ3 666 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 REEP3Q6NUK4 255 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 C22orf34Q6ZV56 151 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 ZNF550Q7Z398 422 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 NUFIP2Q7Z417 695 aaKnown RBP14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 DHDDSQ86SQ9 333 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 SERPINA11Q86U17 422 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 MTDHQ86UE4 582 aaKnown RBP14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 PTOV1Q86YD1 416 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 WFIKKN1Q96NZ8 548 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 PSD2Q9BQI7 771 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 SLC39A3Q9BRY0 314 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 BCO1Q9HAY6 547 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 CORO2BQ9UQ03 480 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 HDGFL3Q9Y3E1 203 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 TESMINQ9Y4I5 508 aa14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 SPIN1Q9Y657 262 aaPredicted RBP14.2□□□□□ -0.14
CTDSP1-209ENST00000488627 TACC2O95359 2948 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 ZC3H12DA2A288 527 aaKnown RBP14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 SH3D21A4FU49 640 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 C5orf58C9J3I9 102 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 C16orf97H3BN30 126 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 SULT2B1O00204 365 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 TPST1O60507 370 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 GCM2O75603 506 aaPredicted RBP14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 PMS2P2O95744 297 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 FESP07332 822 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 YES1P07947 543 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 TFPIP10646 304 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 POU2F1P14859 743 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 CCNA2P20248 432 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 PRKAR1BP31321 381 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 MAP2K6P52564 334 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 H3F3AP84243 136 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 NFYCQ13952 458 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 SCARB2Q14108 478 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 STAC2Q6ZMT1 411 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 C10orf82Q8WW14 230 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 SLC35B4Q969S0 331 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 KAT8Q9H7Z6 458 aaKnown RBP14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 KLHL14Q9P2G3 628 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 TRAPPC4Q9Y296 219 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 MPDZO75970 2070 aa14.19□□□□□ -0.14
CTDSP1-209ENST00000488627 ZNF814B7Z6K7 855 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 FXYD1O00168 92 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 FRS3O43559 492 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 IMPDH2P12268 514 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 UQCRBP14927 111 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 SLC6A2P23975 617 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 GZMMP51124 257 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 PCBP3P57721 371 aaKnown RBP14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 MTPNP58546 118 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 CSNK2A1P68400 391 aaPredicted RBP14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 HOXC5Q00444 222 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 RASGEF1BQ0VAM2 473 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 CAPRIN1Q14444 709 aaKnown RBP14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 PDK3Q15120 406 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 EXOC3L2Q2M3D2 409 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 TMEM201Q5SNT2 666 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 WBP2NLQ6ICG8 309 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 DHRS4L2Q6PKH6 230 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 TFAP2EQ6VUC0 442 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 NET1Q7Z628 596 aaPredicted RBP14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 TMEM200AQ86VY9 491 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 NRGNQ92686 78 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 DNAJA3Q96EY1 480 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 POLDIP3Q9BY77 421 aaKnown RBP14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 ARMC7Q9H6L4 198 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 C12orf49Q9H741 205 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 KLHL9Q9P2J3 617 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 NDRG3Q9UGV2 375 aa14.18□□□□□ -0.14
CTDSP1-209ENST00000488627 IGKV3D-15A0A087WSY6 115 aa14.17□□□□□ -0.14
CTDSP1-209ENST00000488627 ZNF716A6NP11 495 aa14.17□□□□□ -0.14
CTDSP1-209ENST00000488627 ZNF724A8MTY0 619 aa14.17□□□□□ -0.14
CTDSP1-209ENST00000488627 DNPH1O43598 174 aa14.17□□□□□ -0.14
CTDSP1-209ENST00000488627 RAMP1O60894 148 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms