RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 TLR4O00206 839 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 IGSF6O95976 241 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 CHRNA1P02708 482 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 ZP3P21754 424 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 CCNE1P24864 410 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 MAT2AP31153 395 aaKnown RBP3.1□□□□□ -1.91
ITGB1-214ENST00000488427 CD52P31358 61 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 SLC6A8P48029 635 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 HAND2P61296 217 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 ZNF33BQ06732 778 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 PUDPQ08623 228 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 ACSF3Q4G176 576 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-214ENST00000488427 TMEM179Q6ZVK1 233 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 TICAM2Q86XR7 235 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 LRRC43Q8N309 656 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 C14orf178Q8N769 122 aaPredicted RBP3.1□□□□□ -1.91
ITGB1-214ENST00000488427 PHYHIPQ92561 330 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 KRT35Q92764 455 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 P3H4Q92791 437 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 NDUFAF3Q9BU61 184 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 NLNQ9BYT8 704 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 ATG10Q9H0Y0 220 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 ALG9Q9H6U8 611 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 SLC38A10Q9HBR0 1119 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 RBM28Q9NW13 759 aaKnown RBP3.1□□□□□ -1.91
ITGB1-214ENST00000488427 KLRF1Q9NZS2 232 aa3.1□□□□□ -1.91
ITGB1-214ENST00000488427 MYO18AQ92614 2054 aaKnown RBP3.1□□□□□ -1.91
ITGB1-214ENST00000488427 PRRC2CQ9Y520 2896 aaKnown RBP3.09□□□□□ -1.91
ITGB1-214ENST00000488427 IGKV6D-21A0A0A0MT36 114 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 SYCE3A1L190 88 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 NUDT21O43809 227 aaKnown RBP3.09□□□□□ -1.91
ITGB1-214ENST00000488427 ECI2O75521 394 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 SLC2A10O95528 541 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 WNT2P09544 360 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 GIG44P09565 113 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-214ENST00000488427 PSMB1P20618 241 aaKnown RBP3.09□□□□□ -1.91
ITGB1-214ENST00000488427 TRIM23P36406 574 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 ACVR1BP36896 505 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 ALDH3B2P48448 385 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 SGSHP51688 502 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 WNT4P56705 351 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 NLRP11P59045 1033 aaKnown RBP3.09□□□□□ -1.91
ITGB1-214ENST00000488427 NDPQ00604 133 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 MYBPC1Q00872 1141 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 SRYQ05066 204 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 GLYR1Q49A26 553 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-214ENST00000488427 CYBRD1Q53TN4 286 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 BEND6Q5SZJ8 279 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-214ENST00000488427 ADAMTSL5Q6ZMM2 481 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 MOB1BQ7L9L4 216 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 SLC34A3Q8N130 599 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 LINC01006Q8NI28 216 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 EXOC6Q8TAG9 804 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 FGF13Q92913 245 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 TADA1Q96BN2 335 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 ZNF707Q96C28 371 aaPredicted RBP3.09□□□□□ -1.91
ITGB1-214ENST00000488427 DTD2Q96FN9 168 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 MSANTD3Q96H12 275 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 ZNF414Q96IQ9 312 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 CABS1Q96KC9 395 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 WRAP53Q9BUR4 548 aaKnown RBP3.09□□□□□ -1.91
ITGB1-214ENST00000488427 C19orf24Q9BVV8 132 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 GLT8D2Q9H1C3 349 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 ELOVL2Q9NXB9 296 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 CYP39A1Q9NYL5 469 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 GALPQ9UBC7 116 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 FZR1Q9UM11 496 aa3.09□□□□□ -1.91
ITGB1-214ENST00000488427 MGAM2Q2M2H8 2515 aa3.09□□□□□ -1.92
ITGB1-214ENST00000488427 SHANK1Q9Y566 2161 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 BSNQ9UPA5 3926 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 ABCA4P78363 2273 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 NUP210Q8TEM1 1887 aaPredicted RBP3.08□□□□□ -1.92
ITGB1-214ENST00000488427 IGLV8-61A0A075B6I0 122 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 K7ENP7 123 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 SSX5O60225 188 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 RAMP1O60894 148 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 STK17BO94768 372 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 P0C879 139 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 SMIM10L2AP0DMW4 78 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 SMIM10L2BP0DMW5 78 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 RALAP11233 206 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 UGT1A3P35503 534 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 OR1D4P47884 311 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 RIPK4P57078 832 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 SRP54P61011 504 aaKnown RBP3.08□□□□□ -1.92
ITGB1-214ENST00000488427 MGAT3Q09327 533 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 CBX3Q13185 183 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 RAB35Q15286 201 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 LINC00303Q3SY05 128 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 CCDC40Q4G0X9 1142 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 DCST2Q5T1A1 773 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 RABEPKQ7Z6M1 372 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 TAF8Q7Z7C8 310 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 ZNF564Q8TBZ8 553 aaPredicted RBP3.08□□□□□ -1.92
ITGB1-214ENST00000488427 ANKRD49Q8WVL7 239 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 ELSPBP1Q96BH3 223 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 COQ7Q99807 217 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 DPH7Q9BTV6 452 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 PLA2G2FQ9BZM2 168 aa3.08□□□□□ -1.92
ITGB1-214ENST00000488427 TMEM117Q9H0C3 514 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms