RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 ZNF607Q96SK3 696 aa14.32□□□□□ -0.12
ERGIC3-216ENST00000488384 PRRG4Q9BZD6 226 aa14.32□□□□□ -0.12
ERGIC3-216ENST00000488384 OR11A1Q9GZK7 315 aa14.32□□□□□ -0.12
ERGIC3-216ENST00000488384 ADAM19Q9H013 955 aa14.32□□□□□ -0.12
ERGIC3-216ENST00000488384 PIF1Q9H611 641 aa14.32□□□□□ -0.12
ERGIC3-216ENST00000488384 PACSIN3Q9UKS6 424 aa14.32□□□□□ -0.12
ERGIC3-216ENST00000488384 USP22Q9UPT9 525 aa14.32□□□□□ -0.12
ERGIC3-216ENST00000488384 TMED7Q9Y3B3 224 aa14.32□□□□□ -0.12
ERGIC3-216ENST00000488384 SPIN1Q9Y657 262 aaPredicted RBP14.32□□□□□ -0.12
ERGIC3-216ENST00000488384 ABCA12Q86UK0 2595 aa14.32□□□□□ -0.12
ERGIC3-216ENST00000488384 CSMD1Q96PZ7 3565 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 TMEM72A0PK05 275 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 PRORSD1PA6NEY8 169 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 AIM2O14862 343 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 HNRNPRO43390 633 aaKnown RBP14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 SERPINB7O75635 380 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 MFN2O95140 757 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 OPN1SWP03999 348 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 CRYBA2P53672 197 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 SIRPAP78324 504 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 VMACQ2NL98 169 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 WBP2NLQ6ICG8 309 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 MEX3BQ6ZN04 569 aaKnown RBP14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 CNEP1R1Q8N9A8 125 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 ROBO4Q8WZ75 1007 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 MARVELD3Q96A59 401 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 STARD4Q96DR4 205 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 REXO5Q96IC2 774 aaKnown RBP14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 ARL5BQ96KC2 179 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 SPOCK3Q9BQ16 436 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 ECSITQ9BQ95 431 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 GPATCH1Q9BRR8 931 aaKnown RBP14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 PIGMQ9H3S5 423 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 TIGARQ9NQ88 270 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 CLEC4AQ9UMR7 237 aa14.31□□□□□ -0.12
ERGIC3-216ENST00000488384 CCT8L1PA6NM43 557 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 FAM220BPB1ANY3 271 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 SS18L1O75177 396 aaPredicted RBP14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 TFPIP10646 304 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 PRF1P14222 555 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 KLK2P20151 261 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 CCNA2P20248 432 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 HTR2AP28223 471 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 DIO1P49895 249 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 RAC3P60763 192 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 COPZ1P61923 177 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 MYBPHQ13203 477 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 EEF1A1P5Q5VTE0 462 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 C8orf82Q6P1X6 216 aaPredicted RBP14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 TMPPEQ6ZT21 453 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 BTLAQ7Z6A9 289 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 LUZP2Q86TE4 346 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 DMRTC2Q8IXT2 367 aaPredicted RBP14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 SMYD1Q8NB12 490 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 GPR32P1Q8NGA4 272 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 ABHD3Q8WU67 409 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 RNASE6Q93091 150 aaKnown RBP14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 C3orf49Q96BT1 292 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 TAMM41Q96BW9 452 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 GMPPAQ96IJ6 420 aaPredicted RBP14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 ZNF583Q96ND8 569 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 WFDC6Q9BQY6 131 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 CMTM6Q9NX76 183 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 PRDM4Q9UKN5 801 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 ARL2BPQ9Y2Y0 163 aa14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 ANKHD1Q8IWZ3 2542 aaKnown RBP14.3□□□□□ -0.12
ERGIC3-216ENST00000488384 APCP25054 2843 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 IGHV3-15A0A0B4J1V0 119 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 ZC3H12DA2A288 527 aaKnown RBP14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 M0QX08 132 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 SYT5O00445 386 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 SMAD9O15198 467 aaKnown RBP14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 ZNF208O43345 1280 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 CGAP01215 116 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 FESP07332 822 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 ENPP1P22413 925 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 PRDX6P30041 224 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 UQCRC1P31930 480 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 NUDT2P50583 147 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 RGS8P57771 180 aaPredicted RBP14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 INTS11Q5TA45 600 aaKnown RBP14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 HACD2Q6Y1H2 254 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 CCDC80Q76M96 950 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 FCRLAQ7L513 359 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 FAM214BQ7L5A3 538 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 ARPINQ7Z6K5 226 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 PATL1Q86TB9 770 aaKnown RBP14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 BHLHE22Q8NFJ8 381 aaPredicted RBP14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 CMTM5Q96DZ9 223 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 DNAJA3Q96EY1 480 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 HDGFL3Q9Y3E1 203 aa14.29□□□□□ -0.12
ERGIC3-216ENST00000488384 TMEM229AB2RXF0 380 aa14.28□□□□□ -0.12
ERGIC3-216ENST00000488384 SULT2B1O00204 365 aa14.28□□□□□ -0.12
ERGIC3-216ENST00000488384 NME4O00746 187 aa14.28□□□□□ -0.12
ERGIC3-216ENST00000488384 MSTNO14793 375 aa14.28□□□□□ -0.12
ERGIC3-216ENST00000488384 SHOX2O60902 331 aaPredicted RBP14.28□□□□□ -0.12
ERGIC3-216ENST00000488384 SMNDC1O75940 238 aaKnown RBP eCLIP14.28□□□□□ -0.12
ERGIC3-216ENST00000488384 PMS2P2O95744 297 aa14.28□□□□□ -0.12
ERGIC3-216ENST00000488384 PLGP00747 810 aaPredicted RBP14.28□□□□□ -0.12
ERGIC3-216ENST00000488384 CD247P20963 164 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms