RNA–Protein interactions for RNA: ENST00000488363.1

MMP11-210, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 549 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-210ENST00000488363 ABLIM2Q6H8Q1 611 aa16.07■□□□□ 0.16
MMP11-210ENST00000488363 LRRC74BQ6ZQY2 392 aa16.07■□□□□ 0.16
MMP11-210ENST00000488363 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.07■□□□□ 0.16
MMP11-210ENST00000488363 CMIPQ8IY22 773 aa16.07■□□□□ 0.16
MMP11-210ENST00000488363 ZNF100Q8IYN0 542 aa16.07■□□□□ 0.16
MMP11-210ENST00000488363 CIARTQ8N365 385 aaPredicted RBP16.07■□□□□ 0.16
MMP11-210ENST00000488363 PNPT1Q8TCS8 783 aaKnown RBP16.07■□□□□ 0.16
MMP11-210ENST00000488363 CNOT9Q92600 299 aaKnown RBP16.07■□□□□ 0.16
MMP11-210ENST00000488363 ZHX1-C8orf76Q96EF9 292 aa16.07■□□□□ 0.16
MMP11-210ENST00000488363 BDH2Q9BUT1 245 aa16.07■□□□□ 0.16
MMP11-210ENST00000488363 ESRP2Q9H6T0 727 aaKnown RBP16.07■□□□□ 0.16
MMP11-210ENST00000488363 EMC3Q9P0I2 261 aa16.07■□□□□ 0.16
MMP11-210ENST00000488363 HDGFL3Q9Y3E1 203 aa16.07■□□□□ 0.16
MMP11-210ENST00000488363 USF3Q68DE3 2245 aa16.07■□□□□ 0.16
MMP11-210ENST00000488363 IGKV3D-15A0A087WSY6 115 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 AGAP5A6NIR3 686 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 CLOCKO15516 846 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 ADAM11O75078 769 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 PMS2P2O95744 297 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 CD3EP07766 207 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 NR2F1P10589 423 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 IDO1P14902 403 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 PAX1P15863 534 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 CLK1P49759 484 aaKnown RBP16.06■□□□□ 0.16
MMP11-210ENST00000488363 SLC18A1P54219 525 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 MAGOHP61326 146 aaKnown RBP16.06■□□□□ 0.16
MMP11-210ENST00000488363 GNA13Q14344 377 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 PDK3Q15120 406 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 STK11Q15831 433 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 COX20Q5RI15 118 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 ADAM5Q6NVV9 412 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 ADGRG3Q86Y34 549 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 DNAJA3Q96EY1 480 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 ARL5BQ96KC2 179 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 MTHFD2LQ9H903 347 aaPredicted RBP16.06■□□□□ 0.16
MMP11-210ENST00000488363 ZNF701Q9NV72 531 aaPredicted RBP16.06■□□□□ 0.16
MMP11-210ENST00000488363 NKIRAS1Q9NYS0 192 aa16.06■□□□□ 0.16
MMP11-210ENST00000488363 TRIM64A6NGJ6 449 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 TRIM64BA6NI03 449 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 RFXANKO14593 260 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 AP3D1O14617 1153 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 DNPH1O43598 174 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 CNOT4O95628 575 aaKnown RBP16.05■□□□□ 0.16
MMP11-210ENST00000488363 KRT75O95678 551 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 IL6P05231 212 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 HEXAP06865 529 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 IL7RP16871 459 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 CCNA2P20248 432 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 HTR3AP46098 478 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 PDCD4Q53EL6 469 aaKnown RBP16.05■□□□□ 0.16
MMP11-210ENST00000488363 LILRB1Q8NHL6 650 aaPredicted RBP16.05■□□□□ 0.16
MMP11-210ENST00000488363 PIGXQ8TBF5 258 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 PIWIL2Q8TC59 973 aaKnown RBP16.05■□□□□ 0.16
MMP11-210ENST00000488363 WDR60Q8WVS4 1066 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 OR11A1Q9GZK7 315 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 MANSC1Q9H8J5 431 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 LAMP3Q9UQV4 416 aa16.05■□□□□ 0.16
MMP11-210ENST00000488363 NSD1Q96L73 2696 aaPredicted RBP16.04■□□□□ 0.16
MMP11-210ENST00000488363 TMED7-TICAM2A0A0A6YYA0 188 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 ZNF716A6NP11 495 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 SMAD7O15105 426 aaKnown RBP16.04■□□□□ 0.16
MMP11-210ENST00000488363 SLC22A3O75751 556 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 DBIP07108 87 aaKnown RBP16.04■□□□□ 0.16
MMP11-210ENST00000488363 COX5AP20674 150 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 RPS4Y1P22090 263 aaKnown RBP16.04■□□□□ 0.16
MMP11-210ENST00000488363 IGHV1-2P23083 117 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 POLR2HP52434 150 aaKnown RBP16.04■□□□□ 0.16
MMP11-210ENST00000488363 ATP5J2P56134 94 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 OR2B6P58173 313 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 BSPH1Q075Z2 132 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 PPA1Q15181 289 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 SLC9B1Q4ZJI4 515 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 SEZ6L2Q6UXD5 910 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 DNAJC14Q6Y2X3 702 aaPredicted RBP16.04■□□□□ 0.16
MMP11-210ENST00000488363 ATG4DQ86TL0 474 aaPredicted RBP16.04■□□□□ 0.16
MMP11-210ENST00000488363 PMM1Q92871 262 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 FBXW5Q969U6 566 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 MUCL1Q96DR8 90 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 MAELQ96JY0 434 aaKnown RBP16.04■□□□□ 0.16
MMP11-210ENST00000488363 NOSIPQ9Y314 301 aaKnown RBP16.04■□□□□ 0.16
MMP11-210ENST00000488363 TMED7Q9Y3B3 224 aa16.04■□□□□ 0.16
MMP11-210ENST00000488363 GPR171O14626 319 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 ERLIN1O75477 346 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 LY6G6DO95868 133 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 GGT1P19440 569 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 MAGEA8P43361 318 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 RPS4XP62701 263 aaKnown RBP16.03■□□□□ 0.16
MMP11-210ENST00000488363 GSTA3Q16772 222 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 ZNF672Q499Z4 452 aaPredicted RBP16.03■□□□□ 0.16
MMP11-210ENST00000488363 TIMM23BQ5SRD1 257 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 MRPL2Q5T653 305 aaKnown RBP16.03■□□□□ 0.16
MMP11-210ENST00000488363 SSX8Q7RTT4 187 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 PEX5LQ8IYB4 626 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 UBE2J2Q8N2K1 259 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 NEUROG1Q92886 237 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 APH1AQ96BI3 265 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 TLCD1Q96CP7 247 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 DDIT4LQ96D03 193 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 TMBIM4Q9HC24 238 aa16.03■□□□□ 0.16
MMP11-210ENST00000488363 SLC6A13Q9NSD5 602 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms