RNA–Protein interactions for RNA: ENST00000488270.1

HDAC10-215, Transcript of histone deacetylase 10, humanhuman

TSL 3

Gene HDAC10, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-215ENST00000488270 HTR3AP46098 478 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 CLK1P49759 484 aaKnown RBP16.86■□□□□ 0.29
HDAC10-215ENST00000488270 SF3A3Q12874 501 aaKnown RBP eCLIP16.86■□□□□ 0.29
HDAC10-215ENST00000488270 LARS2Q15031 903 aaKnown RBP16.86■□□□□ 0.29
HDAC10-215ENST00000488270 GCNT6Q5T4J0 391 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 COMTD1Q86VU5 262 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 LURAP1LQ8IV03 231 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 SLC43A2Q8N370 569 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 NFKBIDQ8NI38 313 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 BBS10Q8TAM1 723 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 ANKRD27Q96NW4 1050 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 ZNF317Q96PQ6 595 aaPredicted RBP16.86■□□□□ 0.29
HDAC10-215ENST00000488270 PSD2Q9BQI7 771 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 TMEM38AQ9H6F2 299 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 BCO1Q9HAY6 547 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 ZNF232Q9UNY5 417 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 IFT52Q9Y366 437 aa16.86■□□□□ 0.29
HDAC10-215ENST00000488270 MPDZO75970 2070 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 TMED7-TICAM2A0A0A6YYA0 188 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 TMEM72A0PK05 275 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 ZC3H12DA2A288 527 aaKnown RBP16.85■□□□□ 0.29
HDAC10-215ENST00000488270 TMEM247A6NEH6 219 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 C16orf97H3BN30 126 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 ATP8B1O43520 1251 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 YES1P07947 543 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 VIMP08670 466 aaKnown RBP16.85■□□□□ 0.29
HDAC10-215ENST00000488270 POU2F1P14859 743 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 ETS2P15036 469 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 POLR2HP52434 150 aaKnown RBP16.85■□□□□ 0.29
HDAC10-215ENST00000488270 CDK6Q00534 326 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 SELPLGQ14242 412 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 ZSWIM7Q19AV6 140 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 ZNF311Q5JNZ3 666 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 REEP3Q6NUK4 255 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 STAC2Q6ZMT1 411 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 MTDHQ86UE4 582 aaKnown RBP16.85■□□□□ 0.29
HDAC10-215ENST00000488270 TMEM200AQ86VY9 491 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 PTOV1Q86YD1 416 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 REXO5Q96IC2 774 aaKnown RBP16.85■□□□□ 0.29
HDAC10-215ENST00000488270 CGREF1Q99674 301 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 CLEC4MQ9H2X3 399 aaPredicted RBP16.85■□□□□ 0.29
HDAC10-215ENST00000488270 SAR1AQ9NR31 198 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.85■□□□□ 0.29
HDAC10-215ENST00000488270 TMED7Q9Y3B3 224 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 HDGFL3Q9Y3E1 203 aa16.85■□□□□ 0.29
HDAC10-215ENST00000488270 A0A1W2PPR1 153 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 ZNF814B7Z6K7 855 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 SULT2B1O00204 365 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 SIAH2O43255 324 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 ZNF208O43345 1280 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 GCM2O75603 506 aaPredicted RBP16.84■□□□□ 0.29
HDAC10-215ENST00000488270 PMS2P2O95744 297 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 HRGP04196 525 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 FESP07332 822 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 TROVE2P10155 538 aaKnown RBP eCLIP16.84■□□□□ 0.29
HDAC10-215ENST00000488270 TFPIP10646 304 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 CCNA2P20248 432 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 MDH1P40925 334 aaKnown RBP16.84■□□□□ 0.29
HDAC10-215ENST00000488270 ARFIP2P53365 341 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 H3F3AP84243 136 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 EXOC3L2Q2M3D2 409 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 HSP90B2PQ58FF3 399 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 TFAP2EQ6VUC0 442 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 DHDDSQ86SQ9 333 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 SERPINA11Q86U17 422 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 CDC20BQ86Y33 519 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 DNAJA3Q96EY1 480 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 POLDIP3Q9BY77 421 aaKnown RBP16.84■□□□□ 0.29
HDAC10-215ENST00000488270 LIME1Q9H400 295 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 C12orf49Q9H741 205 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 KLHL28Q9NXS3 571 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 NDRG3Q9UGV2 375 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 TRAPPC4Q9Y296 219 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 SPIN1Q9Y657 262 aaPredicted RBP16.84■□□□□ 0.29
HDAC10-215ENST00000488270 ABCA4P78363 2273 aa16.84■□□□□ 0.29
HDAC10-215ENST00000488270 FRS3O43559 492 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 TPST1O60507 370 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 IMPDH2P12268 514 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 EDNRAP25101 427 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 NTF4P34130 210 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 KCNJ5P48544 419 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 MAP2K6P52564 334 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 CSNK2A1P68400 391 aaPredicted RBP16.83■□□□□ 0.28
HDAC10-215ENST00000488270 HOXC5Q00444 222 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 RASGEF1BQ0VAM2 473 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 TESK1Q15569 626 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 TMEM201Q5SNT2 666 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 ANKRD34AQ69YU3 496 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 ABLIM2Q6H8Q1 611 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 ZNF550Q7Z398 422 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 CDH24Q86UP0 819 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 SLC35B4Q969S0 331 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 ZNF775Q96BV0 537 aaPredicted RBP16.83■□□□□ 0.28
HDAC10-215ENST00000488270 ZNF300Q96RE9 604 aaPredicted RBP16.83■□□□□ 0.28
HDAC10-215ENST00000488270 KAT8Q9H7Z6 458 aaKnown RBP16.83■□□□□ 0.28
HDAC10-215ENST00000488270 KLHL9Q9P2J3 617 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 CORO2BQ9UQ03 480 aa16.83■□□□□ 0.28
HDAC10-215ENST00000488270 IGKV3D-15A0A087WSY6 115 aa16.82■□□□□ 0.28
HDAC10-215ENST00000488270 ZNF716A6NP11 495 aa16.82■□□□□ 0.28
HDAC10-215ENST00000488270 ZNF724A8MTY0 619 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms