RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 Q71RC1 249 aaPredicted RBP17.11■□□□□ 0.33
CD55-209ENST00000488171 MAVSQ7Z434 540 aa17.11■□□□□ 0.33
CD55-209ENST00000488171 ATG4DQ86TL0 474 aaPredicted RBP17.11■□□□□ 0.33
CD55-209ENST00000488171 CMIPQ8IY22 773 aa17.11■□□□□ 0.33
CD55-209ENST00000488171 GLB1L3Q8NCI6 653 aaPredicted RBP17.11■□□□□ 0.33
CD55-209ENST00000488171 AKAP1Q92667 903 aaKnown RBP eCLIP17.11■□□□□ 0.33
CD55-209ENST00000488171 DNAJA3Q96EY1 480 aa17.11■□□□□ 0.33
CD55-209ENST00000488171 ZBTB18Q99592 522 aa17.11■□□□□ 0.33
CD55-209ENST00000488171 POTEKPQ9BYX7 375 aa17.11■□□□□ 0.33
CD55-209ENST00000488171 OR11A1Q9GZK7 315 aa17.11■□□□□ 0.33
CD55-209ENST00000488171 SPIN1Q9Y657 262 aaPredicted RBP17.11■□□□□ 0.33
CD55-209ENST00000488171 NIPBLQ6KC79 2804 aaeCLIP17.1■□□□□ 0.338e-7■■■□□ 15.3
CD55-209ENST00000488171 ZNF716A6NP11 495 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 SLCO1B7G3V0H7 640 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 H7C1Q1 480 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 LYZL6O75951 148 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 PMS2P2O95744 297 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 MVDP53602 400 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 LTBQ06643 244 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 PDK3Q15120 406 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 PDCD4Q53EL6 469 aaKnown RBP17.1■□□□□ 0.33
CD55-209ENST00000488171 NXNQ6DKJ4 435 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 ADAM5Q6NVV9 412 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 GALNT5Q7Z7M9 940 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 PIWIL2Q8TC59 973 aaKnown RBP17.1■□□□□ 0.33
CD55-209ENST00000488171 TMEM171Q8WVE6 324 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 USB1Q9BQ65 265 aaKnown RBP17.1■□□□□ 0.33
CD55-209ENST00000488171 MANSC1Q9H8J5 431 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 MTHFD2LQ9H903 347 aaPredicted RBP17.1■□□□□ 0.33
CD55-209ENST00000488171 TMBIM4Q9HC24 238 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 ZNF701Q9NV72 531 aaPredicted RBP17.1■□□□□ 0.33
CD55-209ENST00000488171 HDGFL3Q9Y3E1 203 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 RNF115Q9Y4L5 304 aa17.1■□□□□ 0.33
CD55-209ENST00000488171 ARID1AO14497 2285 aa17.09■□□□□ 0.33
CD55-209ENST00000488171 RFXANKO14593 260 aa17.09■□□□□ 0.33
CD55-209ENST00000488171 SLC22A3O75751 556 aa17.09■□□□□ 0.33
CD55-209ENST00000488171 IL6P05231 212 aa17.09■□□□□ 0.33
CD55-209ENST00000488171 IDO1P14902 403 aa17.09■□□□□ 0.33
CD55-209ENST00000488171 COX5AP20674 150 aa17.09■□□□□ 0.33
CD55-209ENST00000488171 IGHV1-2P23083 117 aa17.09■□□□□ 0.33
CD55-209ENST00000488171 CLK1P49759 484 aaKnown RBP17.09■□□□□ 0.33
CD55-209ENST00000488171 ANXA11P50995 505 aaKnown RBP17.09■□□□□ 0.33
CD55-209ENST00000488171 CAPRIN1Q14444 709 aaKnown RBP17.09■□□□□ 0.33
CD55-209ENST00000488171 CLEC9AQ6UXN8 241 aa17.09■□□□□ 0.33
CD55-209ENST00000488171 WDR60Q8WVS4 1066 aa17.09■□□□□ 0.33
CD55-209ENST00000488171 ESRP2Q9H6T0 727 aaKnown RBP17.09■□□□□ 0.33
CD55-209ENST00000488171 NGBQ9NPG2 151 aa17.09■□□□□ 0.33
CD55-209ENST00000488171 NKIRAS1Q9NYS0 192 aa17.09■□□□□ 0.33
CD55-209ENST00000488171 ROS1P08922 2347 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 TMED7-TICAM2A0A0A6YYA0 188 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 TRIM64A6NGJ6 449 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 TRIM64BA6NI03 449 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 DNPH1O43598 174 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 RAMP1O60894 148 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 TMCC2O75069 709 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 CNOT4O95628 575 aaKnown RBP17.08■□□□□ 0.32
CD55-209ENST00000488171 NR2F1P10589 423 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 CCNA2P20248 432 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 FKBP2P26885 142 aaKnown RBP17.08■□□□□ 0.32
CD55-209ENST00000488171 NTF4P34130 210 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 BEND6Q5SZJ8 279 aaPredicted RBP17.08■□□□□ 0.32
CD55-209ENST00000488171 MRPL2Q5T653 305 aaKnown RBP17.08■□□□□ 0.32
CD55-209ENST00000488171 DNAJC14Q6Y2X3 702 aaPredicted RBP17.08■□□□□ 0.32
CD55-209ENST00000488171 ZNF100Q8IYN0 542 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 NEUROG1Q92886 237 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 ZHX1-C8orf76Q96EF9 292 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 OR52B2Q96RD2 323 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 BDH2Q9BUT1 245 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 CXorf56Q9H5V9 222 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 SDR39U1Q9NRG7 319 aaPredicted RBP17.08■□□□□ 0.32
CD55-209ENST00000488171 EMC3Q9P0I2 261 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 OSGIN1Q9UJX0 560 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 TMED7Q9Y3B3 224 aa17.08■□□□□ 0.32
CD55-209ENST00000488171 TMEM72A0PK05 275 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 DPRXA6NFQ7 191 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 FAAHO00519 579 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 CLOCKO15516 846 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 KRT75O95678 551 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 LY6G6DO95868 133 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 HEXAP06865 529 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 DBIP07108 87 aaKnown RBP17.07■□□□□ 0.32
CD55-209ENST00000488171 CD3EP07766 207 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 IL7RP16871 459 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 HTR3AP46098 478 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 SLC16A1P53985 500 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 H3F3AP84243 136 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 BSPH1Q075Z2 132 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 STK11Q15831 433 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 GSTA3Q16772 222 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 CCDC103Q8IW40 242 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 PIGXQ8TBF5 258 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 PMM1Q92871 262 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 ZIM2Q9NZV7 527 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 TMEM181Q9P2C4 612 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 LAMP3Q9UQV4 416 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 TRAPPC4Q9Y296 219 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 NOSIPQ9Y314 301 aaKnown RBP17.07■□□□□ 0.32
CD55-209ENST00000488171 DSPPQ9NZW4 1301 aa17.07■□□□□ 0.32
CD55-209ENST00000488171 ZNF208O43345 1280 aa17.06■□□□□ 0.32
CD55-209ENST00000488171 PGM3O95394 542 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms