RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 EFCAB13Q8IY85 973 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 CCDC170Q8IYT3 715 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 SVOPLQ8N434 492 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 FAM86B1Q8N7N1 296 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 ANKRD20A12PQ8NF67 263 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 BRSK1Q8TDC3 778 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 CRNKL1Q9BZJ0 848 aaKnown RBP1.68□□□□□ -2.14
SMC4-219ENST00000487747 CCL28Q9NRJ3 127 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 CYP39A1Q9NYL5 469 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 TRIM10Q9UDY6 481 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 DNPEPQ9ULA0 475 aa1.68□□□□□ -2.14
SMC4-219ENST00000487747 IGKV3D-11A0A0A0MRZ8 115 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 SUPT3HO75486 399 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 TLX1NBP0CAT3 122 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 TDGF1P13385 188 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 GDI1P31150 447 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 TDGF1P3P51864 188 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 MORF4L2Q15014 288 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 SHISA6Q6ZSJ9 500 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 KRT77Q7Z794 578 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 CCNYQ8ND76 341 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 OR6C4Q8NGE1 309 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 EXOC6Q8TAG9 804 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 SMARCD2Q92925 531 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 VMP1Q96GC9 406 aa1.67□□□□□ -2.14
SMC4-219ENST00000487747 CARHSP1Q9Y2V2 147 aaKnown RBP1.67□□□□□ -2.14
SMC4-219ENST00000487747 IGLV11-55A0A075B6I3 123 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 TRBV2A0A0J9YWF9 115 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 VSTM2BA6NLU5 285 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 ANKRD30BLA7E2S9 258 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 F10P00742 488 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 IGLV2-23P01705 113 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 CLUP10909 449 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 UQCRBP14927 111 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 ATP5DP30049 168 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 CD80P33681 288 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 CYLC1P35663 651 aaPredicted RBP1.66□□□□□ -2.14
SMC4-219ENST00000487747 MAGEA5P43359 124 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 ATXN3P54252 364 aaPredicted RBP1.66□□□□□ -2.14
SMC4-219ENST00000487747 TMEM183BQ1AE95 376 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 PRSS41Q7RTY9 318 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 TMEM183AQ8IXX5 376 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 OR52E1Q8NGJ3 308 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 PSMA8Q8TAA3 256 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 DTX3LQ8TDB6 740 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 ASB9Q96DX5 294 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 FCRL1Q96LA6 429 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 NDFIP1Q9BT67 221 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 C2orf40Q9H1Z8 148 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 LPAR2Q9HBW0 351 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 ZNF586Q9NXT0 402 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 MRPL39Q9NYK5 338 aaKnown RBP1.66□□□□□ -2.14
SMC4-219ENST00000487747 CNOT2Q9NZN8 540 aaKnown RBP1.66□□□□□ -2.14
SMC4-219ENST00000487747 HMG20BQ9P0W2 317 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 ANAPC7Q9UJX3 599 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 OARD1Q9Y530 152 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 V9GY05 133 aa1.66□□□□□ -2.14
SMC4-219ENST00000487747 NID2Q14112 1375 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 DUX1O43812 170 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 MUTP22033 750 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 HSPA1LP34931 641 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 SPIBQ01892 262 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 KLHL30Q0D2K2 578 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 SNX1Q13596 522 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 NSUN5P1Q3KNT7 163 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 ACSM5Q6NUN0 579 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 FAHD2BQ6P2I3 314 aaPredicted RBP1.65□□□□□ -2.15
SMC4-219ENST00000487747 TMIGD1Q6UXZ0 262 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 C10orf53Q8N6V4 93 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 OR9G1Q8NH87 305 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 ZFP90Q8TF47 636 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 ZCCHC13Q8WW36 166 aaKnown RBP1.65□□□□□ -2.15
SMC4-219ENST00000487747 NCLNQ969V3 563 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 FAHD2AQ96GK7 314 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 ALDH8A1Q9H2A2 487 aaPredicted RBP1.65□□□□□ -2.15
SMC4-219ENST00000487747 RHOJQ9H4E5 214 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 SDK2Q58EX2 2172 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 YEATS2Q9ULM3 1422 aa1.65□□□□□ -2.15
SMC4-219ENST00000487747 C7orf66A4D0T2 115 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 JAK2O60674 1132 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 PNPP00491 289 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 PGAM1P18669 254 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 CXCR2P25025 360 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 KPNA2P52292 529 aaKnown RBP1.64□□□□□ -2.15
SMC4-219ENST00000487747 OSTNP61366 133 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 REG3AQ06141 175 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 RIPPLY1Q0D2K3 151 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 RAB40BQ12829 278 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 PPP2R5CQ13362 524 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 LASP1Q14847 261 aaKnown RBP1.64□□□□□ -2.15
SMC4-219ENST00000487747 ARL6IP1Q15041 203 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 UBE2SQ16763 222 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 BOLA3Q53S33 107 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 WDR88Q6ZMY6 472 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 PGAM4Q8N0Y7 254 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 HIST1H4GQ99525 98 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 FOXC2Q99958 501 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 C20orf85Q9H1P6 137 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 ZNF226Q9NYT6 803 aa1.64□□□□□ -2.15
SMC4-219ENST00000487747 HEBP2Q9Y5Z4 205 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms