RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 PCCBP05166 539 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 CLUP10909 449 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 TNNI3P19429 210 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 MNAT1P51948 309 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 SH3BGRP55822 239 aaPredicted RBP1.94□□□□□ -2.1
CCDC66-221ENST00000487739 HTD2P86397 168 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 SCGB2A2Q13296 93 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 SLC5A12Q1EHB4 618 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 LINC00483Q53H64 154 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 APTXQ7Z2E3 356 aaKnown RBP1.94□□□□□ -2.1
CCDC66-221ENST00000487739 KIAA1328Q86T90 577 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 TMEM17Q86X19 198 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 ZNF695Q8IW36 515 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 PAQR8Q8TEZ7 354 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 FAM151AQ8WW52 585 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 C4orf36Q96KX1 117 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 TSNARE1Q96NA8 513 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 SLC6A7Q99884 636 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 CITED1Q99966 193 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 ZNF670Q9BS34 389 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 DUSP16Q9BY84 665 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 MAGT1Q9H0U3 335 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 WDR76Q9H967 626 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 MEAF6Q9HAF1 191 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 EML4Q9HC35 981 aaKnown RBP1.94□□□□□ -2.1
CCDC66-221ENST00000487739 CHRNA9Q9UGM1 479 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 AURKCQ9UQB9 309 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 OARD1Q9Y530 152 aa1.94□□□□□ -2.1
CCDC66-221ENST00000487739 PPIAL4CA0A0B4J2A2 164 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 PP2D1A8MPX8 630 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 SULT2B1O00204 365 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 CTAGE5O15320 804 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 OR1F1O43749 312 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 B3GALNT1O75752 331 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 TM7SF2O76062 418 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 PLEKP08567 350 aaPredicted RBP1.93□□□□□ -2.1
CCDC66-221ENST00000487739 PPIAL4GP0DN37 164 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 CALCBP10092 127 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 CALB2P22676 271 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 COX7A1P24310 79 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 PRPS1P60891 318 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 POLR2FP61218 127 aaKnown RBP1.93□□□□□ -2.1
CCDC66-221ENST00000487739 CSNK1G2P78368 415 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 CNTN2Q02246 1040 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 LIPNQ5VXI9 398 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 FAHD2BQ6P2I3 314 aaPredicted RBP1.93□□□□□ -2.1
CCDC66-221ENST00000487739 ACP7Q6ZNF0 438 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 ARCQ7LC44 396 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 VRK2Q86Y07 508 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 CENPLQ8N0S6 344 aaPredicted RBP1.93□□□□□ -2.1
CCDC66-221ENST00000487739 DENND6BQ8NEG7 585 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 OR5L2Q8NGL0 311 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 CCDC110Q8TBZ0 833 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 AENQ8WTP8 325 aaKnown RBP1.93□□□□□ -2.1
CCDC66-221ENST00000487739 STARD8Q92502 1023 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 MYLPFQ96A32 169 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 FAHD2AQ96GK7 314 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 C12orf66Q96MD2 445 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 MCHR1Q99705 422 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 SPIN2AQ99865 258 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 SPIN2BQ9BPZ2 258 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 DPH5Q9H2P9 285 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 COQ10BQ9H8M1 238 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 B3GNT2Q9NY97 397 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 MTRF1LQ9UGC7 380 aaKnown RBP1.93□□□□□ -2.1
CCDC66-221ENST00000487739 GSTK1Q9Y2Q3 226 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 PLLPQ9Y342 182 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 U3KQV3 271 aa1.93□□□□□ -2.1
CCDC66-221ENST00000487739 VSTM2BA6NLU5 285 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 K7EPI3 171 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 SMPD2O60906 423 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 ZNF780AO75290 641 aaPredicted RBP1.92□□□□□ -2.1
CCDC66-221ENST00000487739 RETP07949 1114 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 TPSB2P20231 275 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 HSPA2P54652 639 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 RIPPLY1Q0D2K3 151 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 PJVKQ0ZLH3 352 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 RAB40BQ12829 278 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 TPSAB1Q15661 275 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 CCDC57Q2TAC2 916 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 CCDC92Q53HC0 331 aaPredicted RBP1.92□□□□□ -2.1
CCDC66-221ENST00000487739 C5orf47Q569G3 176 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 TMEM41BQ5BJD5 291 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 CASC10Q5T4H9 136 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 NCR3LG1Q68D85 454 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 ATL3Q6DD88 541 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 AFTPHQ6ULP2 937 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 COX15Q7KZN9 410 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 ZSCAN30Q86W11 494 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 ZNF573Q86YE8 665 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 NRMQ8IXM6 262 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 KIR3DL3Q8N743 410 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 C15orf54Q8N8G6 183 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 FADS6Q8N9I5 356 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 OR6X1Q8NH79 312 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 PNPT1Q8TCS8 783 aaKnown RBP1.92□□□□□ -2.1
CCDC66-221ENST00000487739 RPL3LQ92901 407 aaKnown RBP1.92□□□□□ -2.1
CCDC66-221ENST00000487739 RASL11BQ9BPW5 248 aa1.92□□□□□ -2.1
CCDC66-221ENST00000487739 NRIP2Q9BQI9 281 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms