RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 CENPPQ6IPU0 288 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 PMF1Q6P1K2 205 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 WDR74Q6RFH5 385 aaPredicted RBP2.53□□□□□ -2
SNRNP27-204ENST00000487029 KDELC1Q6UW63 502 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 ARCQ7LC44 396 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 ZNF589Q86UQ0 364 aaPredicted RBP2.53□□□□□ -2
SNRNP27-204ENST00000487029 LCA5Q86VQ0 697 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 SLC35F2Q8IXU6 374 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 CEND1Q8N111 149 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 ANKRD49Q8WVL7 239 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 B3GALT6Q96L58 329 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 MAGEB18Q96M61 343 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 PSKH2Q96QS6 385 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 CCT7Q99832 543 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 POLDIP2Q9Y2S7 368 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 MEMO1Q9Y316 297 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 TIMM10BQ9Y5J6 103 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 KIF25-AS1Q9Y6Z4 181 aa2.53□□□□□ -2
SNRNP27-204ENST00000487029 PNPLA6Q8IY17 1366 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 K7N7A8 449 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 HDAC3O15379 428 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF208O43345 1280 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 RIPK2O43353 540 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 LGALS2P05162 132 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 ANXA13P27216 316 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 GCAP28676 217 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 AQP1P29972 269 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 MAP3K8P41279 467 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 BTDP43251 543 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 RIPK4P57078 832 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF45Q02386 682 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 FGL1Q08830 312 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 NCBP1Q09161 790 aaKnown RBP2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 ARL6IP1Q15041 203 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 DPYSL2Q16555 572 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 ZSCAN25Q6NSZ9 544 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 MTERF4Q7Z6M4 381 aaKnown RBP2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 TMEM179BQ7Z7N9 219 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 C11orf53Q8IXP5 236 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF679Q8IYX0 411 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 ZCCHC7Q8N3Z6 543 aaKnown RBP2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 CATSPER1Q8NEC5 780 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 BBS1Q8NFJ9 593 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 OR56B4Q8NH76 319 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF564Q8TBZ8 553 aaPredicted RBP2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 MAIP1Q8WWC4 291 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 HTR3CQ8WXA8 447 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF606Q8WXB4 792 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 RAPGEF5Q92565 580 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 EFHD2Q96C19 240 aaPredicted RBP2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 SLC41A3Q96GZ6 507 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 CCNL2Q96S94 520 aaPredicted RBP2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 NPAS2Q99743 824 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 KLHDC3Q9BQ90 382 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 NICN1Q9BSH3 213 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 TMEM43Q9BTV4 400 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 YTHDF1Q9BYJ9 559 aaKnown RBP2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 LRRC40Q9H9A6 602 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 POPDC2Q9HBU9 364 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 MARCH5Q9NX47 278 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 CDH9Q9ULB4 789 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 CLEC4AQ9UMR7 237 aa2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 PRPF19Q9UMS4 504 aaKnown RBP2.52□□□□□ -2.01
SNRNP27-204ENST00000487029 CENPJQ9HC77 1338 aaPredicted RBP2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 A0A1B0GUS0 222 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 PCP4L1A6NKN8 68 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 CXCL11O14625 94 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 POLR2DO15514 142 aaKnown RBP2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF264O43296 627 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 PFKFB2O60825 505 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 AP2A1O95782 977 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 IGHV3-48P01763 117 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 CAPN1P07384 714 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 TPM2P07951 284 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 CCDC130P13994 396 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 POU2F1P14859 743 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 COX5AP20674 150 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 PCMT1P22061 227 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 RPL13AP40429 203 aaKnown RBP2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 CCT3P49368 545 aaKnown RBP2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 CEBPDP49716 269 aaPredicted RBP2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 AIF1P55008 147 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 RIPK1Q13546 671 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 SFT2D3Q587I9 215 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 EOGTQ5NDL2 527 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 OR4F3Q6IEY1 312 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 UNQ9370/PRO34162Q6UXP9 181 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 SCARA5Q6ZMJ2 495 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 ACOT7LQ6ZUV0 252 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 ZNF100Q8IYN0 542 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 OR2L13Q8N349 312 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 EIF1ADQ8N9N8 165 aaKnown RBP2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 C16orf74Q96GX8 76 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 PGLYRP4Q96LB8 373 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 RPRD1AQ96P16 312 aaPredicted RBP2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 RBM14Q96PK6 669 aaKnown RBP2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 TBX15Q96SF7 602 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 SECISBP2Q96T21 854 aaKnown RBP2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 GAL3ST1Q99999 423 aa2.51□□□□□ -2.01
SNRNP27-204ENST00000487029 CAPS2Q9BXY5 557 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms